PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343240.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARR-B

Protein Properties

Length: 479aa MW: 53275.8 Da PI: 5.6438

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85	7.9e-27	189	243	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +prl+Wt+ LH++Fv +v+qL G +kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl+ XP_027343240.1 189 RPRLVWTSALHNHFVAVVNQL-GVDKAVPKRILELMNVPGLTRENVASHLQKHRLH 243 59*****************.******************************97 PP
2	Myb_DNA-binding	35	3.2e-11	191	241	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT ++ +v +v+qlG + +k+I + m+ g+t++++ s++qk++ XP_027343240.1 191 RLVWTSALHNHFVAVVNQLGVDkaVPKRILELMNvPGLTRENVASHLQKHR 241 789**********************************************97 PP
3	Response_reg	41.7	6.2e-15	26	121	10	108
HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE.STTTHHHHHHHHHTTESEEEESS CS Response_reg 10 vrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt.ahgeeedalealkaGakdflsKp 101 +e+++q++ ++++d+ al+l++e++ +D+il+D+ mp+md +e+l++ + ++ +i+++ + ++e+ +l+ ++ Ga d +Kp XP_027343240.1 26 SLEIIKQLCI-----AFDTCSDSLLALNLVHERKgcFDIILIDVHMPNMDSYEFLRRVIQDI-DVLVIMMSdDDDDESAILKSMNDGACDLWTKP 114 5555555554.....457899**********9********************6655.6999999956666***************** PP --HHHHH CS Response_reg 102 fdpeelv 108 + +++ XP_027343240.1 115 LREYDVR 121 8876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MANGDVIPST FQTGLRVLAI DHDINSLEII KQLCIAFDTC SDSLLALNLV HERKGCFDII 60 LIDVHMPNMD SYEFLRRVIQ DIDVLVIMMS DDDDDESAIL KSMNDGACDL WTKPLREYDV 120 RNMWRHVARK VLNDKKNQKK LGSLDNNNGQ NQRNGDSEVN SSVINATEGV QTNSNLNESE 180 NNYQPPARRP RLVWTSALHN HFVAVVNQLG VDKAVPKRIL ELMNVPGLTR ENVASHLQKH 240 RLHLKSKNEA ARQQNEMSMA NTVPSSTETN AEAPREMPMP NTVPSSTEMS MPNTVPSSTE 300 TSADDFQALA AATNLSYETL PNLPPNMMLT EAQNALIGWS NQYNTEQTNA YAHAPLNMAM 360 PLDHDSTSYL TWPPSNTIDN LVGNFGTLLA DQRQENQLSL LHHHVHSQPP PITVSGSFSS 420 AIHNYNFRRN TLIDHGLLSP QPQLSSSLGA VEVPGENGGI FHLRNSILPR SAMRIISDI

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MANGDVIPST FQTGLRVLAI DHDINSLEII KQLCIAFDTC SDSLLALNLV HERKGCFDII  60
LIDVHMPNMD SYEFLRRVIQ DIDVLVIMMS DDDDDESAIL KSMNDGACDL WTKPLREYDV  120
RNMWRHVARK VLNDKKNQKK LGSLDNNNGQ NQRNGDSEVN SSVINATEGV QTNSNLNESE  180
NNYQPPARRP RLVWTSALHN HFVAVVNQLG VDKAVPKRIL ELMNVPGLTR ENVASHLQKH  240
RLHLKSKNEA ARQQNEMSMA NTVPSSTETN AEAPREMPMP NTVPSSTEMS MPNTVPSSTE  300
TSADDFQALA AATNLSYETL PNLPPNMMLT EAQNALIGWS NQYNTEQTNA YAHAPLNMAM  360
PLDHDSTSYL TWPPSNTIDN LVGNFGTLLA DQRQENQLSL LHHHVHSQPP PITVSGSFSS  420
AIHNYNFRRN TLIDHGLLSP QPQLSSSLGA VEVPGENGGI FHLRNSILPR SAMRIISDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	9e-53	ARR-B family protein