PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343015.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

FAR1

Protein Properties

Length: 658aa MW: 77012.7 Da PI: 8.4864

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.3	5.1e-18	28	107	10	90
FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +GF vrk++ +++k +g i + ++vC keg+r+++k++ + ++raetrt+C ++++ + ++k++v+++++eHnH+l+ XP_027343015.1 28 TGFGVRKQYYNRRKVDGVISSCRYVCCKEGHRKDDKRN-LTVTKHRAETRTDCLVRITLLLGCNNKYVVHEFVEEHNHPLQ 107 7********************************999.899999********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MECEYVAWKL RVGLQFNTLE EAWKYWITGF GVRKQYYNRR KVDGVISSCR YVCCKEGHRK 60 DDKRNLTVTK HRAETRTDCL VRITLLLGCN NKYVVHEFVE EHNHPLQLPE TTHMLASHRK 120 ITEVQAHQID LAESSGLRQK SSFQLMSTLA GHRANVGYTP LDAKNYLKSK RQWGMLYGEV 180 GYLMEYFQRQ LIENPSFFHA YQMDVEEQIT NVFWADAKMV IDYGCFGEVI SLDTTYCTNR 240 ANRPLTAESF KWLFETFLEA HNQKQPQTIF TDQDQAMAKA IVQVMPHTHH ALCTWHLMQN 300 GIKHLGNLMR GETHFLRDLK KCMYDYDSSI EFEGAWRRFI TEYNEKWASC YLKDVFTLGM 360 RSTQLSESLN SDFKACMKSG VDIKQFFAHF ERVVEDKRYN ELKHEYDSRH KLAILQYEFA 420 QFLACNISQR FETPPIIEYV ITKVHQQRSW TVTFEPSSST IYCSCKKFET FGILCCHASK 480 VFEANDVKVI PDKYILKRWT TQGRSEIIHN VKGKEVKGDP KLSTTRRYRN LACKIIRLAS 540 DVSSSEEYYQ LVDDSINNLI SKITKLQLQT NSLMDKDKDD AEFMANNDGT QPKGFKRRPS 600 SKRKGSKRFK SWVELQAKRK KSRTPILDQS TSQEYQPVVY DPVEEQLHDT NDSILDDI

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MECEYVAWKL RVGLQFNTLE EAWKYWITGF GVRKQYYNRR KVDGVISSCR YVCCKEGHRK  60
DDKRNLTVTK HRAETRTDCL VRITLLLGCN NKYVVHEFVE EHNHPLQLPE TTHMLASHRK  120
ITEVQAHQID LAESSGLRQK SSFQLMSTLA GHRANVGYTP LDAKNYLKSK RQWGMLYGEV  180
GYLMEYFQRQ LIENPSFFHA YQMDVEEQIT NVFWADAKMV IDYGCFGEVI SLDTTYCTNR  240
ANRPLTAESF KWLFETFLEA HNQKQPQTIF TDQDQAMAKA IVQVMPHTHH ALCTWHLMQN  300
GIKHLGNLMR GETHFLRDLK KCMYDYDSSI EFEGAWRRFI TEYNEKWASC YLKDVFTLGM  360
RSTQLSESLN SDFKACMKSG VDIKQFFAHF ERVVEDKRYN ELKHEYDSRH KLAILQYEFA  420
QFLACNISQR FETPPIIEYV ITKVHQQRSW TVTFEPSSST IYCSCKKFET FGILCCHASK  480
VFEANDVKVI PDKYILKRWT TQGRSEIIHN VKGKEVKGDP KLSTTRRYRN LACKIIRLAS  540
DVSSSEEYYQ LVDDSINNLI SKITKLQLQT NSLMDKDKDD AEFMANNDGT QPKGFKRRPS  600
SKRKGSKRFK SWVELQAKRK KSRTPILDQS TSQEYQPVVY DPVEEQLHDT NDSILDDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	592	598	PKGFKRR
2	596	608	KRRPSSKRKGSKR
3	602	621	KRKGSKRFKSWVELQAKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-76	FAR1 family protein