PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027342950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 250aa MW: 27849.3 Da PI: 8.7565 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16 | 3.5e-05 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C k F++ L H+++H XP_027342950.1 71 YTCSFCRKEFKSAQALGGHMNVH 93 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MKRNNLMKGN YTYTSSTNKS PTKESSTYVL NCYNKNTMAK EFIWDCNNSH SNGEYHDQDY 60 MNGFPWPPRS YTCSFCRKEF KSAQALGGHM NVHRRDRARL RQSPPTEGGQ SHVLNLNLEP 120 NANPNNSTSS LSLPTSSSPP LKPVSCTLPL FVSATPPPFS PPSASHSSEL KRWVVVDGIL 180 LNPLSTKNPE PTKSKIAESL SAGIGEYDHA FGREDGCKML KKGEILRMDL EIGLPKSYDL 240 DLELRLGTYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23130.1 | 4e-24 | C2H2 family protein |