PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342629.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 462aa MW: 51004.2 Da PI: 8.9013

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.7e-05	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F r nL+ H r H XP_027342629.1 56 FVCEICLKGFQRDQNLQLHRRGH 78 89*******************88 PP
2	zf-C2H2	13.5	0.00021	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_027342629.1 132 WKCEKCSKRYAVQSDWKAHSKTC 154 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MDDGEISNAF PPQNPSTASS NNPPVLKRKR NLPGNPDPEA EVIALSPKTL MATNRFVCEI 60 CLKGFQRDQN LQLHRRGHNL PWKLKQRTSK EVRKRVYVCP EKTCVHHHPS RALGDLTGIK 120 KHFCRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYK CDCGTIFSRR DSFITHRAFC 180 DALAEETARV NAASNMSSYS IMQNSLGPNM ATHFSSIFKA ISCTEEPSNQ TSNKGLSLWM 240 TQTSSQAHET MANNNLHEFH QLGSATSSTA IYCSGGNPLV SSCSNPPPSN YQLNWVQFGS 300 KLSSNGSDQE LTSTVSLPLV NNIVKDNPNQ LISVPSLYSS QHQSHQTTSA NMSATALLQK 360 AAQIGTTSSD PSLFLGSLGL KCNTPGQDGN KFCAMYGSSS VLTSHGTEAE NNYSGDLSQM 420 PPTKRRHVQN TEETAWGQTR DFLGVGVANH LPPYINQRMD LF

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MDDGEISNAF PPQNPSTASS NNPPVLKRKR NLPGNPDPEA EVIALSPKTL MATNRFVCEI  60
CLKGFQRDQN LQLHRRGHNL PWKLKQRTSK EVRKRVYVCP EKTCVHHHPS RALGDLTGIK  120
KHFCRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYK CDCGTIFSRR DSFITHRAFC  180
DALAEETARV NAASNMSSYS IMQNSLGPNM ATHFSSIFKA ISCTEEPSNQ TSNKGLSLWM  240
TQTSSQAHET MANNNLHEFH QLGSATSSTA IYCSGGNPLV SSCSNPPPSN YQLNWVQFGS  300
KLSSNGSDQE LTSTVSLPLV NNIVKDNPNQ LISVPSLYSS QHQSHQTTSA NMSATALLQK  360
AAQIGTTSSD PSLFLGSLGL KCNTPGQDGN KFCAMYGSSS VLTSHGTEAE NNYSGDLSQM  420
PPTKRRHVQN TEETAWGQTR DFLGVGVANH LPPYINQRMD LF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-142	C2H2 family protein