PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342628.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 494aa MW: 54600.6 Da PI: 9.2178

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342628.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.4e-05	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F r nL+ H r H XP_027342628.1 56 FVCEICLKGFQRDQNLQLHRRGH 78 89*******************88 PP
2	zf-C2H2	13.4	0.00023	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_027342628.1 132 WKCEKCSKRYAVQSDWKAHSKTC 154 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MDDGEISNAF PPQNPSTASS NNPPVLKRKR NLPGNPDPEA EVIALSPKTL MATNRFVCEI 60 CLKGFQRDQN LQLHRRGHNL PWKLKQRTSK EVRKRVYVCP EKTCVHHHPS RALGDLTGIK 120 KHFCRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYK CDCGTIFSRV LLEKFLRTHG 180 TTNKIVCTAL IVPLTSTLFK RRDSFITHRA FCDALAEETA RVNAASNMSS YSIMQNSLGP 240 NMATHFSSIF KAISCTEEPS NQTSNKGLSL WMTQTSSQAH ETMANNNLHE FHQLGSATSS 300 TAIYCSGGNP LVSSCSNPPP SNYQLNWVQF GSKLSSNGSD QELTSTVSLP LVNNIVKDNP 360 NQLISVPSLY SSQHQSHQTT SANMSATALL QKAAQIGTTS SDPSLFLGSL GLKCNTPGQD 420 GNKFCAMYGS SSVLTSHGTE AENNYSGDLS QMPPTKRRHV QNTEETAWGQ TRDFLGVGVA 480 NHLPPYINQR MDLF

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MDDGEISNAF PPQNPSTASS NNPPVLKRKR NLPGNPDPEA EVIALSPKTL MATNRFVCEI  60
CLKGFQRDQN LQLHRRGHNL PWKLKQRTSK EVRKRVYVCP EKTCVHHHPS RALGDLTGIK  120
KHFCRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYK CDCGTIFSRV LLEKFLRTHG  180
TTNKIVCTAL IVPLTSTLFK RRDSFITHRA FCDALAEETA RVNAASNMSS YSIMQNSLGP  240
NMATHFSSIF KAISCTEEPS NQTSNKGLSL WMTQTSSQAH ETMANNNLHE FHQLGSATSS  300
TAIYCSGGNP LVSSCSNPPP SNYQLNWVQF GSKLSSNGSD QELTSTVSLP LVNNIVKDNP  360
NQLISVPSLY SSQHQSHQTT SANMSATALL QKAAQIGTTS SDPSLFLGSL GLKCNTPGQD  420
GNKFCAMYGS SSVLTSHGTE AENNYSGDLS QMPPTKRRHV QNTEETAWGQ TRDFLGVGVA  480
NHLPPYINQR MDLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-136	C2H2 family protein