PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342578.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 429aa MW: 47632.4 Da PI: 8.1522

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_027342578.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	16.4	2.5e-05	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k + +s++k Hi+t+ XP_027342578.1 134 WVCDKCSKGYAVQSDYKAHIKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MLDNSASSGA PSSSDAAFAL SENGVPNKRK RRPAGTPDPD AEVVSLSPTT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET QGQKKKVFVC PEPSCLHHDP CHALGDLVGI 120 KKHFRRKHSN HKQWVCDKCS KGYAVQSDYK AHIKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACNVRQHRPE LQALQPACSS RTASSASPSS EANFSIAPTL QGMPLPKPAD QQASLLTSEI 240 PNKHSISHNL ELQLLSSSIS SQEKRNSKEN YETHLKLSIG SCSNDKGSES ERACSETHRS 300 PPGAERNVND YSTLEVARLK EFAGEELKLA MAEKAYAEEA RREAKRQIEM AELEFENAKS 360 IRKQAQAELS KAEDLRKQAI KKISSTVMEI TCQTCKQHFQ SSTAGGFPSE ETSIVMSYMS 420 SATTEGEAE

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MLDNSASSGA PSSSDAAFAL SENGVPNKRK RRPAGTPDPD AEVVSLSPTT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET QGQKKKVFVC PEPSCLHHDP CHALGDLVGI  120
KKHFRRKHSN HKQWVCDKCS KGYAVQSDYK AHIKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACNVRQHRPE LQALQPACSS RTASSASPSS EANFSIAPTL QGMPLPKPAD QQASLLTSEI  240
PNKHSISHNL ELQLLSSSIS SQEKRNSKEN YETHLKLSIG SCSNDKGSES ERACSETHRS  300
PPGAERNVND YSTLEVARLK EFAGEELKLA MAEKAYAEEA RREAKRQIEM AELEFENAKS  360
IRKQAQAELS KAEDLRKQAI KKISSTVMEI TCQTCKQHFQ SSTAGGFPSE ETSIVMSYMS  420
SATTEGEAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	33	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-138	C2H2 family protein