PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342577.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 276aa MW: 29992.5 Da PI: 7.5391

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00061	119	141	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_027342577.1 119 YECKTCNRTFPSFQALGGHRASH 141 99**********99999998887 PP
2	zf-C2H2	13.4	0.00023	189	211	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H XP_027342577.1 189 HECSICGSEFTSGQALGGHMRRH 211 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MLSEMDMGTE ELVLGSCNHD TTQIAKGKRT KRRVRPLSPC ATAMTSSCSS GGGSFSSTTF 60 EGTDQEEEDM ANCLILLAQG RGGDDSDHKH HQQQLEHVHG VDVKTNSNMG STKINFYVYE 120 CKTCNRTFPS FQALGGHRAS HKKPKVIEGN RKSLIACDFE EAKQSHVRIS LQLGCGNSNN 180 RGGNKSKIHE CSICGSEFTS GQALGGHMRR HRASNNNGAV HNAFDAGVEV KPRNVLELDL 240 NLPAPEDDVR ESKFQFPANQ SSMVLSAAPA LVGCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	9e-59	C2H2 family protein