PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342522.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 761aa MW: 84811.3 Da PI: 7.2782

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342522.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.9	1.1e-24	62	166	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 f+k+lt sd++++g +++ +++a+e+ + k++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F +++r + XP_027342522.1 62 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRTSRgE 155 99***************************63.4445569*********************************************99999 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++el+v+v+r+ XP_027342522.1 156 NGELRVGVRRA 166 ********996 PP
2	Auxin_resp	120	1.9e-39	191	273	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rWp+SkWrsLk XP_027342522.1 191 AWHAIRTGTMFTVYYKPRTSPAEFIVPYDQYMESLKSNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWPKSKWRSLK 273 89*******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence
MPVYDLPPKI LCRVINVMLK AEPDTDEVFA QVTLVPESNQ NENAVEKEAP PTPPPRFHVH 60 SFCKTLTASD TSTHGGFSVL RRHADECLPP LDMSKQPPTQ ELVAKDLHGN EWRFRHIFRG 120 QPRRHLLQSG WSVFVSSKRL VAGDAFIFLR TSRGENGELR VGVRRAMRQQ GNVPSSVISS 180 HSMHLGVLAT AWHAIRTGTM FTVYYKPRTS PAEFIVPYDQ YMESLKSNYT IGMRFKMRFE 240 GEEAPEQRFT GTIVGIEDAD PQRWPKSKWR SLKVRWDETS NIPRPERVSQ WKIEPAHAPP 300 ALNPLPMPRA KRPRSNAVPS SPDSSVLTRE ASSKVSIDPL PASGFQRVLQ GQELSTLRGN 360 FAESNESDTA EKSVAWPPVA DDEKIDVVST SRRYASEGWM SMGRHEPAYP DLLSGFGSHG 420 DLSSHPSYVD QTGPVANPGR KHLLDREGKH NVINPWSVMP SNLSLSLLDS NIKGSAQASD 480 TTYQVRGNIR YNSAFGDYPV LHGHKVEHPH GNLLMPPPTS TQFESPHSRE LLPKPVSGKP 540 SEVARHKDGD CKLFGISLLS SPIAPEPSVS QRNVASEQPV GHVHCSSHQQ RKFENVQKSE 600 HSRGSKLSDG LLTDDHEKLL QTSQPHLNDV QSKPHGGSAR SCTKVHKKGI ALGRSVDLTK 660 FSNYDELIAE LDQLFDFGGE LSSPQKDWLI VYTDNEGDMM LVGDDPWQEF VAMVRKIYIY 720 PKEEIQKMSP GTLSSRNEES ASEGADAQEI KCQLNHSASD T

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence

MPVYDLPPKI LCRVINVMLK AEPDTDEVFA QVTLVPESNQ NENAVEKEAP PTPPPRFHVH  60
SFCKTLTASD TSTHGGFSVL RRHADECLPP LDMSKQPPTQ ELVAKDLHGN EWRFRHIFRG  120
QPRRHLLQSG WSVFVSSKRL VAGDAFIFLR TSRGENGELR VGVRRAMRQQ GNVPSSVISS  180
HSMHLGVLAT AWHAIRTGTM FTVYYKPRTS PAEFIVPYDQ YMESLKSNYT IGMRFKMRFE  240
GEEAPEQRFT GTIVGIEDAD PQRWPKSKWR SLKVRWDETS NIPRPERVSQ WKIEPAHAPP  300
ALNPLPMPRA KRPRSNAVPS SPDSSVLTRE ASSKVSIDPL PASGFQRVLQ GQELSTLRGN  360
FAESNESDTA EKSVAWPPVA DDEKIDVVST SRRYASEGWM SMGRHEPAYP DLLSGFGSHG  420
DLSSHPSYVD QTGPVANPGR KHLLDREGKH NVINPWSVMP SNLSLSLLDS NIKGSAQASD  480
TTYQVRGNIR YNSAFGDYPV LHGHKVEHPH GNLLMPPPTS TQFESPHSRE LLPKPVSGKP  540
SEVARHKDGD CKLFGISLLS SPIAPEPSVS QRNVASEQPV GHVHCSSHQQ RKFENVQKSE  600
HSRGSKLSDG LLTDDHEKLL QTSQPHLNDV QSKPHGGSAR SCTKVHKKGI ALGRSVDLTK  660
FSNYDELIAE LDQLFDFGGE LSSPQKDWLI VYTDNEGDMM LVGDDPWQEF VAMVRKIYIY  720
PKEEIQKMSP GTLSSRNEES ASEGADAQEI KCQLNHSASD T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	0.0	ARF family protein