PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342520.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 807aa    MW: 89832.6 Da    PI: 7.0123
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.94.7e-24151252199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + k++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_027342520.1 151 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 242
                     99*****************************63.4445569************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_027342520.1 243 GELRVGVRRA 252
                     99*****996 PP
2Auxin_resp119.82.1e-39277359183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rWp+SkWrsLk
  XP_027342520.1 277 AWHAIRTGTMFTVYYKPRTSPAEFIVPYDQYMESLKSNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWPKSKWRSLK 359
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    
MASSDVSIKG NSVNGKGENN DARNSAGECQ HASSSSSTRD AEAALYRELW HACAGPLVTV  60
PREGERVFYF PQGHIEQVEA STNQVAEQHM PVYDLPPKIL CRVINVMLKA EPDTDEVFAQ  120
VTLVPESNQN ENAVEKEAPP TPPPRFHVHS FCKTLTASDT STHGGFSVLR RHADECLPPL  180
DMSKQPPTQE LVAKDLHGNE WRFRHIFRGQ PRRHLLQSGW SVFVSSKRLV AGDAFIFLRG  240
ENGELRVGVR RAMRQQGNVP SSVISSHSMH LGVLATAWHA IRTGTMFTVY YKPRTSPAEF  300
IVPYDQYMES LKSNYTIGMR FKMRFEGEEA PEQRFTGTIV GIEDADPQRW PKSKWRSLKV  360
RWDETSNIPR PERVSQWKIE PAHAPPALNP LPMPRAKRPR SNAVPSSPDS SVLTREEKSV  420
AWPPVADDEK IDVVSTSRRY ASEGWMSMGR HEPAYPDLLS GFGSHGDLSS HPSYVDQTGP  480
VANPGRKHLL DREGKHNVIN PWSVMPSNLS LSLLDSNIKG SAQASDTTYQ VRGNIRYNSA  540
FGDYPVLHGH KVEHPHGNLL MPPPTSTQFE SPHSRELLPK PVSGKPSEVA RHKDGDCKLF  600
GISLLSSPIA PEPSVSQRNV ASEQPVGHVH CSSHQQRKFE NVQKSEHSRG SKLSDGLLTD  660
DHEKLLQTSQ PHLNDVQSKP HGGSARSCTK VHKKGIALGR SVDLTKFSNY DELIAELDQL  720
FDFGGELSSP QKDWLIVYTD NEGDMMLVGD DPWQEFVAMV RKIYIYPKEE IQKMSPGTLS  780
SRNEESASEG ADAQEIKCQL NHSASDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein