PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027342518.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ARF | ||||||||
Protein Properties | Length: 835aa MW: 92883 Da PI: 6.8911 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 75.8 | 4.9e-24 | 151 | 252 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++ +++a+e+ + k++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F + ++ XP_027342518.1 151 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 242 99*****************************63.4445569************************************************..4499 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+v+v+r+ XP_027342518.1 243 GELRVGVRRA 252 99*****996 PP | |||||||
2 | Auxin_resp | 119.8 | 2.2e-39 | 277 | 359 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rWp+SkWrsLk XP_027342518.1 277 AWHAIRTGTMFTVYYKPRTSPAEFIVPYDQYMESLKSNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWPKSKWRSLK 359 89*******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 835 aa Download sequence |
MASSDVSIKG NSVNGKGENN DARNSAGECQ HASSSSSTRD AEAALYRELW HACAGPLVTV 60 PREGERVFYF PQGHIEQVEA STNQVAEQHM PVYDLPPKIL CRVINVMLKA EPDTDEVFAQ 120 VTLVPESNQN ENAVEKEAPP TPPPRFHVHS FCKTLTASDT STHGGFSVLR RHADECLPPL 180 DMSKQPPTQE LVAKDLHGNE WRFRHIFRGQ PRRHLLQSGW SVFVSSKRLV AGDAFIFLRG 240 ENGELRVGVR RAMRQQGNVP SSVISSHSMH LGVLATAWHA IRTGTMFTVY YKPRTSPAEF 300 IVPYDQYMES LKSNYTIGMR FKMRFEGEEA PEQRFTGTIV GIEDADPQRW PKSKWRSLKV 360 RWDETSNIPR PERVSQWKIE PAHAPPALNP LPMPRAKRPR SNAVPSSPDS SVLTREGMVK 420 WVLQGQELST LRGNFAESNE SDTAEKSVAW PPVADDEKID VVSTSRRYAS EGWMSMGRHE 480 PAYPDLLSGF GSHGDLSSHP SYVDQTGPVA NPGRKHLLDR EGKHNVINPW SVMPSNLSLS 540 LLDSNIKGSA QASDTTYQVR GNIRYNSAFG DYPVLHGHKV EHPHGNLLMP PPTSTQFESP 600 HSRELLPKPV SGKPSEVARH KDGDCKLFGI SLLSSPIAPE PSVSQRNVAS EQPVGHVHCS 660 SHQQRKFENV QKSEHSRGSK LSDGLLTDDH EKLLQTSQPH LNDVQSKPHG GSARSCTKVH 720 KKGIALGRSV DLTKFSNYDE LIAELDQLFD FGGELSSPQK DWLIVYTDNE GDMMLVGDDP 780 WQEFVAMVRK IYIYPKEEIQ KMSPGTLSSR NEESASEGAD AQEIKCQLNH SASDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 0.0 | ARF family protein |