PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342512.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 850aa    MW: 94367.6 Da    PI: 6.9501
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342512.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.71.3e-24151255199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                     f+k+lt sd++++g +++ +++a+e+      + k++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F +++r +
  XP_027342512.1 151 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRTSRgE 244
                     99*****************************63.4445569************************************************99999* PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     ++el+v+v+r+
  XP_027342512.1 245 NGELRVGVRRA 255
                     ********996 PP
2Auxin_resp119.72.2e-39280362183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rWp+SkWrsLk
  XP_027342512.1 280 AWHAIRTGTMFTVYYKPRTSPAEFIVPYDQYMESLKSNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWPKSKWRSLK 362
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 850 aa     Download sequence    
MASSDVSIKG NSVNGKGENN DARNSAGECQ HASSSSSTRD AEAALYRELW HACAGPLVTV  60
PREGERVFYF PQGHIEQVEA STNQVAEQHM PVYDLPPKIL CRVINVMLKA EPDTDEVFAQ  120
VTLVPESNQN ENAVEKEAPP TPPPRFHVHS FCKTLTASDT STHGGFSVLR RHADECLPPL  180
DMSKQPPTQE LVAKDLHGNE WRFRHIFRGQ PRRHLLQSGW SVFVSSKRLV AGDAFIFLRT  240
SRGENGELRV GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAIRTGTMF TVYYKPRTSP  300
AEFIVPYDQY MESLKSNYTI GMRFKMRFEG EEAPEQRFTG TIVGIEDADP QRWPKSKWRS  360
LKVRWDETSN IPRPERVSQW KIEPAHAPPA LNPLPMPRAK RPRSNAVPSS PDSSVLTREA  420
SSKVSIDPLP ASGFQRVLQG QELSTLRGNF AESNESDTAE KSVAWPPVAD DEKIDVVSTS  480
RRYASEGWMS MGRHEPAYPD LLSGFGSHGD LSSHPSYVDQ TGPVANPGRK HLLDREGKHN  540
VINPWSVMPS NLSLSLLDSN IKGSAQASDT TYQVRGNIRY NSAFGDYPVL HGHKVEHPHG  600
NLLMPPPTST QFESPHSREL LPKPVSGKPS EVARHKDGDC KLFGISLLSS PIAPEPSVSQ  660
RNVASEQPVG HVHCSSHQQR KFENVQKSEH SRGSKLSDGL LTDDHEKLLQ TSQPHLNDVQ  720
SKPHGGSARS CTKVHKKGIA LGRSVDLTKF SNYDELIAEL DQLFDFGGEL SSPQKDWLIV  780
YTDNEGDMML VGDDPWQEFV AMVRKIYIYP KEEIQKMSPG TLSSRNEESA SEGADAQEIK  840
CQLNHSASDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein