PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342289.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 159aa    MW: 17828.8 Da    PI: 10.4197
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.000423759123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    +kC+ C+++Fs+   L  H  +H
  XP_027342289.1 37 FKCKTCNRRFSSFQALGGHRASH 59
                    89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MKREREEGEL NKGNCLMLLT KVGESETNSS KDDIGAFKCK TCNRRFSSFQ ALGGHRASHK  60
KPKLMVTDLS CHHDRLQSPT MKPRMHPCPV CGLEFAIGQA LGGHMRKHRS AINDGLMTLK  120
HSLPILKKSK DAKRLNGCLD LNLTPLENDL KLNLRVRLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.15e-38C2H2 family protein