PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027342284.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | SBP | ||||||||
Protein Properties | Length: 177aa MW: 20193.7 Da PI: 9.7326 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.7 | 1.1e-40 | 54 | 130 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+e+C++dl +ak+yhrrhkvCe h+ka+vv+v+g++qrfCqqCsrfhel efD++krsCrrrLa+hnerrrk++ XP_027342284.1 54 CCQAEKCNVDLHDAKQYHRRHKVCEYHAKAQVVIVAGIRQRFCQQCSRFHELAEFDDKKRSCRRRLAGHNERRRKNS 130 6**************************************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MDKVKREGME DCVHSQNGYL ELEEDKKKKG VLAMGRKKGS ASAGGGSSGN SMRCCQAEKC 60 NVDLHDAKQY HRRHKVCEYH AKAQVVIVAG IRQRFCQQCS RFHELAEFDD KKRSCRRRLA 120 GHNERRRKNS DQSQTEGSNL QGTSPHLKDI ACGHANDRGR IHITNQENDA YKHFQIR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 128 | KKRSCRRRLAGHNERRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15270.1 | 4e-43 | SBP family protein |