PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342283.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 381aa    MW: 42789.6 Da    PI: 8.3268
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342283.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.35.5e-08124144526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ ++r G C++Gd+C +aHg
  XP_027342283.1 124 VCPEYRR-GGCSRGDSCEYAHG 144
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MSSVCAEQHK LHPSHRLPSP KKSIREIDIP PRKLLTRRAA TYDGATDIYS DDTILQKFLP  60
YNNLDSDDSD SEDPYSSDHF RMFEFKVRRC TRSRSHDWTD CPFAHPGEKA RRRDPRRYHY  120
SGTVCPEYRR GGCSRGDSCE YAHGVFECWL HPARYRTEAC KDGKNCKRKV CFFAHTPRQL  180
RILPVTSSSS TSSNDKKNKF LNHASRSNNN NCCLFCHGAA SSASPTSTLF GMSHYSPPLS  240
PSSSTSPPLS PFQLRNGVSS ISHYGVENHY GVENHHNRVV SYKDMLTELM SSLEGLSFNE  300
VLSLNEGSQV SAAKTPNLSW LDVPLNREDQ QQQFIVSSTT QTSTSSNGKF SCSKFLGNDN  360
KVVVGPDGNS PDLGWVNELL M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.11e-76C3H family protein