PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027342205.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | AP2 | ||||||||
Protein Properties | Length: 458aa MW: 51217.3 Da PI: 8.9729 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3.2e-17 | 141 | 190 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_027342205.1 141 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 190 78*******************......55************************998 PP | |||||||
2 | AP2 | 41.3 | 3.9e-13 | 233 | 283 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_027342205.1 233 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 283 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence |
MLDLNLNADS TQNGDSLVML DKFPEASSGT SNSSVVNAEG SSNGGGDEDS CSTRAGGVFT 60 FKFGILKVEG ENDVVATKEL FPVSAGNWQG QSSTSSFPAR KSLVDLSLDH HRGEKGETKV 120 VQVQQQPQVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA 180 YDRAAIKFRG LDADINFNLV DYEEDMKQMK NLSKEEFVHI LRRHSTGFSR GSSKYRGVTL 240 HKCGRWEARM GQFLGKKYIY LGLFDSEVEA ARAYDKAAIK CNGREAVTNF EQSTYESEMK 300 PEAINEGGNH NLDLNLGIAT PGHGPKENVG HLPFHSIPHN MHPGRSSKID TNVNSVIGAP 360 SLKRLVENEE RPSLWNATYS SFFPNVSREN WDRSFKRTLQ LGVANARPAY CHPNTTVLYC 420 SIIRILNFSY VPINCNLSNK ICELSSPEPL FHFIWRTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-109 | AP2 family protein |