PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342203.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 477aa MW: 52345.2 Da PI: 8.6468

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342203.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.3	3.4e-17	141	190	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_027342203.1 141 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 190 78*****************......55**********************998 PP
2	AP2	41.2	4.1e-13	233	283	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_027342203.1 233 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 283 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MLDLNLNADS TQNGDSLVML DKFPEASSGT SNSSVVNAEG SSNGGGDEDS CSTRAGGVFT 60 FKFGILKVEG ENDVVATKEL FPVSAGNWQG QSSTSSFPAR KSLVDLSLDH HRGEKGETKV 120 VQVQQQPQVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA 180 YDRAAIKFRG LDADINFNLV DYEEDMKQMK NLSKEEFVHI LRRHSTGFSR GSSKYRGVTL 240 HKCGRWEARM GQFLGKKYIY LGLFDSEVEA ARAYDKAAIK CNGREAVTNF EQSTYESEMK 300 PEAINEGGNH NLDLNLGIAT PGHGPKENVG HLPFHSIPHN MHPGRSSKID TNVNSVIGAP 360 SLKRLVENEE RPSLWNATYS SFFPNVERAE RIGIDPSKGL SNWAWQTHGQ LTATPIPPFS 420 TAASSGFSIS ATFPSTAIFP TKSVNSVPQS LCFTSSGAHV SNAPPYYYQV NSPQAPS

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MLDLNLNADS TQNGDSLVML DKFPEASSGT SNSSVVNAEG SSNGGGDEDS CSTRAGGVFT  60
FKFGILKVEG ENDVVATKEL FPVSAGNWQG QSSTSSFPAR KSLVDLSLDH HRGEKGETKV  120
VQVQQQPQVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA  180
YDRAAIKFRG LDADINFNLV DYEEDMKQMK NLSKEEFVHI LRRHSTGFSR GSSKYRGVTL  240
HKCGRWEARM GQFLGKKYIY LGLFDSEVEA ARAYDKAAIK CNGREAVTNF EQSTYESEMK  300
PEAINEGGNH NLDLNLGIAT PGHGPKENVG HLPFHSIPHN MHPGRSSKID TNVNSVIGAP  360
SLKRLVENEE RPSLWNATYS SFFPNVERAE RIGIDPSKGL SNWAWQTHGQ LTATPIPPFS  420
TAASSGFSIS ATFPSTAIFP TKSVNSVPQS LCFTSSGAHV SNAPPYYYQV NSPQAPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-115	AP2 family protein