PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342165.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 327aa MW: 37788.2 Da PI: 8.7675

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.7	2.3e-06	58	82	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ dC s++rk++L+rH+ +H XP_027342165.1 58 YVCTvnDCQASYRRKDHLTRHLLLH 82 99********************998 PP
2	zf-C2H2	14.2	0.00013	87	112	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C+ F+ + n+krH + H XP_027342165.1 87 FKCPidNCNLEFTVQGNMKRHVNEiH 112 89*******************99888 PP
3	zf-C2H2	17.2	1.4e-05	127	151	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y Cp Cgk+F+ s L++H +H XP_027342165.1 127 YLCPeiGCGKVFRFASKLQKHEDSH 151 569999***************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MIEKLWMFSV KHWIPDKELQ NARGSVFPLD GSVSGWETSC EAPSRMPRSR TVQNERPYVC 60 TVNDCQASYR RKDHLTRHLL LHQGKTFKCP IDNCNLEFTV QGNMKRHVNE IHDDSSINAS 120 VKSEQQYLCP EIGCGKVFRF ASKLQKHEDS HVKLESVDVV CLEPGCMKHF TNAQCLKAHV 180 KSCHQYVTCD TCGTKQLKKN IKRHLCSHEA NSSSETFHCE FKGCVCTFSK KSNLDKHKKA 240 VHFKEKPFVC GFPDCGMRFA YKHVRDNHEK TGKHVFTLGD FERADEQFRS RSRGGRKRIC 300 PTVEMLVRKR VTPPSQLEDW LFMQDSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.1	1e-109	C2H2 family protein