PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027341986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 199aa MW: 21260.6 Da PI: 9.215 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4.1e-18 | 63 | 113 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r r +lg+f ta +Aa a+++a+++++g XP_027341986.1 63 CNYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGTFSTAIGAALAYDEAARAMYG 113 56*****999.**********8...2.359***********************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MLAKAHNKGD GSKSLAKILA RWKEYNAQLD SCNDADKPVR KVPAKGSKKG CMKGKGGPEN 60 SRCNYRGVRQ RTWGKWVAEI REPNRGNRLW LGTFSTAIGA ALAYDEAARA MYGSCARLNF 120 PNVSVSSFSE ESSKDSPAAN QSGSPMAVTA HTESMISPNN SRVGDAEDMD MESISLSLGV 180 KHENGDGESG TNSSPPSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 2e-39 | ERF family protein |