PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341953.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family BBR-BPC
Protein Properties Length: 279aa    MW: 31222.9 Da    PI: 10.1114
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind324.53e-9912791301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mddd  +  n+gyyep      +lglqlm  +++rd+k     r+  + l++ ++++++rd         m++  rd+++++        +++++
  XP_027341953.1   1 MDDDVLNMPNWGYYEPF--RGGHLGLQLMPGMTDRDTKSflpgRDPAM-LMGANGTFHPRDcvvsetpipMNY-VRDNWINQ--------RDRFF 83 
                     899988779******98..4579***************9999888888.99**********************.9*******........789** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++++++         ++ vl++t+ + slq      +++++   r+e+ ++  +    ++ea ++kk++ r  +++pk+kk +k+k+       +
  XP_027341953.1  84 NMQPTNP--------NYAVLPETSGAPSLQI-----IQPPPDTSRDEK-VDRIEELVVKKEAGQSKKRQGRGAQTTPKAKKPRKPKD-------S 157
                     ****655........4899********9999.....444444433333.33332222233444444555555777788888888877.......2 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     ++ +   +r+k +kk+++lv+ng+++D+s+lP+PvCsCtGa++qCY+WG+GGWqSaCCtt++S+yPLP+s krrgaRiagrKmSqgafkk+LekL
  XP_027341953.1 158 SNVSV--QRVKPPKKTMELVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKL 250
                     33333..67999*********************************************************************************** PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aaeGy+++np+DLk+hWA+HGtnkfvtir
  XP_027341953.1 251 AAEGYNFANPIDLKTHWARHGTNKFVTIR 279
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDDDVLNMPN WGYYEPFRGG HLGLQLMPGM TDRDTKSFLP GRDPAMLMGA NGTFHPRDCV  60
VSETPIPMNY VRDNWINQRD RFFNMQPTNP NYAVLPETSG APSLQIIQPP PDTSRDEKVD  120
RIEELVVKKE AGQSKKRQGR GAQTTPKAKK PRKPKDSSNV SVQRVKPPKK TMELVINGID  180
MDISGLPIPV CSCTGAPQQC YRWGCGGWQS ACCTTNVSIY PLPMSMKRRG ARIAGRKMSQ  240
GAFKKVLEKL AAEGYNFANP IDLKTHWARH GTNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-110BBR-BPC family protein