PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341802.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 360aa MW: 38862.4 Da PI: 6.416

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341802.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.3	1.9e-36	20	120	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............ssssaseceaesssssa 82 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+ + + ++s++ + XP_027341802.1 20 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSAIDQLAHLppwkptlpvpnnqnD---------DESHNPN 105 79**************************************************************655543333222220.........2222222 PP TCP 83 snsssg............k 89 + + XP_027341802.1 106 P----NpnpdeailrqlgE 120 2....12223333332221 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MRGGVGEIVE VEGGHIVRST GRKDRHSKVC TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD 60 RPSKAVDWLI NKAKSAIDQL AHLPPWKPTL PVPNNQNDDE SHNPNPNPNP DEAILRQLGE 120 NENDNENGTE NENESFRHHD GGGGGSAFLP LDNDAIRSFF PTTTSSLIQF QSYPPDLLSR 180 TSSQDLRLSL QSLQDPILLH QNQNEHVLFT GTGFDGMVAW NNASAVAAND TGNDGSGGGG 240 GGGGFVFNAP SASLVPATSP AVVFGQGQYL SQRGPLQSSN NPSVRAWIDA PSFVAADHHL 300 HHHHRHHYLS PAALVYQSSP SSAFAPGGFT GFRVPARIQG EEEHDGVSDK PSSVSSDSRR

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MRGGVGEIVE VEGGHIVRST GRKDRHSKVC TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD  60
RPSKAVDWLI NKAKSAIDQL AHLPPWKPTL PVPNNQNDDE SHNPNPNPNP DEAILRQLGE  120
NENDNENGTE NENESFRHHD GGGGGSAFLP LDNDAIRSFF PTTTSSLIQF QSYPPDLLSR  180
TSSQDLRLSL QSLQDPILLH QNQNEHVLFT GTGFDGMVAW NNASAVAAND TGNDGSGGGG  240
GGGGFVFNAP SASLVPATSP AVVFGQGQYL SQRGPLQSSN NPSVRAWIDA PSFVAADHHL  300
HHHHRHHYLS PAALVYQSSP SSAFAPGGFT GFRVPARIQG EEEHDGVSDK PSSVSSDSRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	4e-52	TCP family protein