PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341533.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

YABBY

Protein Properties

Length: 189aa MW: 21256.2 Da PI: 9.1378

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	235.5	1.2e-72	6	165	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCnt lavsvP +sl+++vtvrCGhC++llsvn+ + q+ ++++ +++ + +++l+ ++++l+ +++++++ +s + + XP_027341533.1 6 MATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQTFPSQDP--QRF--STVAKLQRQHQHLSIQESSSKELGSSSKCK 96 579***************************************************97..333..344455555555555544444444443333 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + e d+e pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_027341533.1 97 S-FEPVDHEQPRIPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 165 3.4567888999999.9**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MSMDMMATER VCYVHCNFCN TTLAVSVPCS SLLTIVTVRC GHCANLLSVN MGASLQTFPS 60 QDPQRFSTVA KLQRQHQHLS IQESSSKELG SSSKCKSFEP VDHEQPRIPP IRPPEKRQRV 120 PSAYNRFIKE EIQRIKASNP DISHREAFST AAKNWAHFPH IHFGLKLDGN KQAKLDQQGD 180 GTQKSNGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	1e-69	YABBY family protein