PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341462.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 568aa MW: 62717.3 Da PI: 6.9129

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53.8	3.5e-17	352	398	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L++l+P++ K +Ka++Le+A+eY+ksLq XP_027341462.1 352 VHNLSERRRRDRINEKMRALQQLIPHS-----SKTDKASMLEEAIEYLKSLQ 398 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MNNNVPDWNF VSDTCVTNQK KPMGVDQELV ELLWENGQVV LHNQAHRKPV MNSIAPRQVH 60 KNFQSTSRTS EPFGNSSTLV QDDETVSWIQ YPLEDPLEQE FCPNILTELP PCEVESYKQI 120 RPFEEGRFSK LDASSAPHVT VSSQSPTMKS SCVQELPGIP IPAPRFHVSD SSQKNNDFGG 180 SCKVLNFSHF SAPLNVSSAS ANAHFRDKIT GNMSKGEIRE CSVMTVGSSY CGSNHIPQDP 240 DASRASSNGV WTNTLSAEPE AIRDDVRRTI PQNEKGKSEM LEPTTTSSSG GSGSSSLEKT 300 CSLSTRNQGK KRKGIDVEES EEQSEDTELK SAVGNKASQR AGLARRNRAA EVHNLSERRR 360 RDRINEKMRA LQQLIPHSSK TDKASMLEEA IEYLKSLQLQ LQVMWMGSGM APMMFPGIQH 420 YMSQMGMGMA TPSFPPIHNP MQLPRVPLDQ SVSASQTPNQ TLMCQNPILG AFNYQNQMQN 480 PALSEQYARY MGYHLMQNAS QPMNVFGYGP RTVQHSQTMI TPSNSSGHMS GAANTDDALS 540 GKMDGDKQLL VTMKTANKPF STTTPSAF

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MNNNVPDWNF VSDTCVTNQK KPMGVDQELV ELLWENGQVV LHNQAHRKPV MNSIAPRQVH  60
KNFQSTSRTS EPFGNSSTLV QDDETVSWIQ YPLEDPLEQE FCPNILTELP PCEVESYKQI  120
RPFEEGRFSK LDASSAPHVT VSSQSPTMKS SCVQELPGIP IPAPRFHVSD SSQKNNDFGG  180
SCKVLNFSHF SAPLNVSSAS ANAHFRDKIT GNMSKGEIRE CSVMTVGSSY CGSNHIPQDP  240
DASRASSNGV WTNTLSAEPE AIRDDVRRTI PQNEKGKSEM LEPTTTSSSG GSGSSSLEKT  300
CSLSTRNQGK KRKGIDVEES EEQSEDTELK SAVGNKASQR AGLARRNRAA EVHNLSERRR  360
RDRINEKMRA LQQLIPHSSK TDKASMLEEA IEYLKSLQLQ LQVMWMGSGM APMMFPGIQH  420
YMSQMGMGMA TPSFPPIHNP MQLPRVPLDQ SVSASQTPNQ TLMCQNPILG AFNYQNQMQN  480
PALSEQYARY MGYHLMQNAS QPMNVFGYGP RTVQHSQTMI TPSNSSGHMS GAANTDDALS  540
GKMDGDKQLL VTMKTANKPF STTTPSAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	357	362	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59060.4	2e-48	bHLH family protein