PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341298.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 376aa    MW: 41581.7 Da    PI: 7.4464
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.83.8e-08128148526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd C FaHg
  XP_027341298.1 128 ACPDFRK-GNCKKGDACEFAHG 148
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MMLGETHRAN PTIHVPPWPI LHDSTPEIFS PYTANADYSP YTLQEALTAL QHYVPASDTD  60
AESDSEVPNL EPDVPVDAYS CDHFRMFEFK VRRCARGRSH DWTECPYAHP GEKARRRDPR  120
KYHYSGTACP DFRKGNCKKG DACEFAHGVF ECWLHPARYR TQPCKDGTSC RRRVCFFAHT  180
PDQLRVLPQQ SPRSANSADS YDGSPLRHVV ESSCSKTLPY VSSPGSISPP MSPPAESPPM  240
SPMTRRSLGS GCVNVNEMVA SLRNLQLGKV KSLPSSWNVP MGSPGFGSPR GPVIRPGFCS  300
LPTTPTQAPG RGGVNYFDLW DQSCEEEPVM ERVESGRGIR ARMFEKLSKE NSLDMSGSGS  360
LSGAPDVGWV SDLVNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-136C3H family protein