PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341250.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family BBR-BPC
Protein Properties Length: 302aa    MW: 33760.6 Da    PI: 10.2679
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind339.86.9e-1042130218301
       GAGA_bind  18 aslkenlglqlmssiaerdaki..rernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksids 110
                     ++l   +++++ s++aer+a+i   e ++a+sek++a+a+rd a+ qrd+ala+r++al+erdn+l+al+ ++n+   + p+g ++ +g+k +++
  XP_027341250.1  21 NALV--MNKKIRSIMAERQAAIleLELEAAISEKNEALAARDAALRQRDEALAQRDNALLERDNALAALQNRSNA--VNFPFGAGIQRGSKRMHH 111
                     5666..999*************77677889*****************************************9997..67899************8 PP

       GAGA_bind 111 lqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak...kkkkksekskkkvkkesaderskaekksidlvlngvs 202
                     + + + +++++ a+ ++++ + +a p++  ++e  ++++ k+++++k+  +k +k   k+kk +e+ +++ ++e+  ++ ++e++ +d++ln v+
  XP_027341250.1 112 SSN-HLSNMTEAAYSTKDMIIRDASPVTVIPSEGVKSHQAKRTKENKVINSKASKppsKVKKMGEDLNRQASSEG--TKFRSEWDRQDVGLNLVA 203
                     887.669*******************9999998888888777776665554444433477777777777776666..67**************** PP

       GAGA_bind 203 lDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkf 297
                     +De+ +PvPvC+CtG++rqCYkWGnGGWqS+CCttt+S+yPLP+ +++r+aRi+grKmS+++f++lL++La+eG+dls p+DLk++WA+HGtn++
  XP_027341250.1 204 FDETIMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPHKRHARIGGRKMSGSVFTRLLSRLASEGHDLSIPLDLKEYWARHGTNRY 298
                     *********************************************************************************************** PP

       GAGA_bind 298 vtir 301
                     +ti+
  XP_027341250.1 299 ITIK 302
                     ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MMAAHVKMWN TDTQHQVKEP NALVMNKKIR SIMAERQAAI LELELEAAIS EKNEALAARD  60
AALRQRDEAL AQRDNALLER DNALAALQNR SNAVNFPFGA GIQRGSKRMH HSSNHLSNMT  120
EAAYSTKDMI IRDASPVTVI PSEGVKSHQA KRTKENKVIN SKASKPPSKV KKMGEDLNRQ  180
ASSEGTKFRS EWDRQDVGLN LVAFDETIMP VPVCTCTGVP RQCYKWGNGG WQSSCCTTTL  240
SMYPLPQLPH KRHARIGGRK MSGSVFTRLL SRLASEGHDL SIPLDLKEYW ARHGTNRYIT  300
IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.12e-96BBR-BPC family protein