PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341031.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 472aa MW: 52090.9 Da PI: 7.6688

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118	1.2e-36	57	216	2	135
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssasec.ea 75 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL++ a ai el+++ +++sa + + XP_027341031.1 57 SGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLINSAADAIAELPSLnntfpdtpkqpsdekraseqGFDSAD-AeLD 150 689***********************************************************99888777666555554444333332.1233 PP TCP 76 esssssasnsssg..kaaksaakskksqksaasalnlak....esrakararare.rtrekmriknk 135 +++ + +++++++ + +++a+s+ s++s+ s l+l++ r kar+rare r + k + k+k XP_027341031.1 151 GENTNYQQHNNQSqnLSLSKSACSSTSETSKGSGLSLSRsdirVNRVKARERARErR-TAKEKEKEK 216 3333333322222345555555666666666666777664344566*******55.444444434 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MEEDEIQAQA CKFPRVGNGR NEEEDGEIRR KGSDGVSTNR FHSWHHSSRI IRVSRASGGK 60 DRHSKVMTSK GLRDRRVRLS VTTAIQFYDL QDRLGYDQPS KAVEWLINSA ADAIAELPSL 120 NNTFPDTPKQ PSDEKRASEQ GFDSADAELD GENTNYQQHN NQSQNLSLSK SACSSTSETS 180 KGSGLSLSRS DIRVNRVKAR ERARERRTAK EKEKEKEKEN ESHNIAPHHH HQQHHNVNPI 240 SQTASFTELL TVGINNAVPT SPRGSVHQNV SDEPNLFNKA SRQQWCSSAP MDYFTSGLLG 300 PSSSRTHHHH HNQPSSSSGF SVSQVQLGHS LPEAMSVSPF NVSGENHSSD PQLQHFSFIP 360 DHLMSAVVTS SASSQPSGND YNLNFTISSG LAGYNRGTLQ SNSPSLLPHF QRFSPIDGST 420 VPFFIGAAPA SAAPTMENHH HHQFSSVFDG SRLQLCYADA CRHSDQKGKA KN

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MEEDEIQAQA CKFPRVGNGR NEEEDGEIRR KGSDGVSTNR FHSWHHSSRI IRVSRASGGK  60
DRHSKVMTSK GLRDRRVRLS VTTAIQFYDL QDRLGYDQPS KAVEWLINSA ADAIAELPSL  120
NNTFPDTPKQ PSDEKRASEQ GFDSADAELD GENTNYQQHN NQSQNLSLSK SACSSTSETS  180
KGSGLSLSRS DIRVNRVKAR ERARERRTAK EKEKEKEKEN ESHNIAPHHH HQQHHNVNPI  240
SQTASFTELL TVGINNAVPT SPRGSVHQNV SDEPNLFNKA SRQQWCSSAP MDYFTSGLLG  300
PSSSRTHHHH HNQPSSSSGF SVSQVQLGHS LPEAMSVSPF NVSGENHSSD PQLQHFSFIP  360
DHLMSAVVTS SASSQPSGND YNLNFTISSG LAGYNRGTLQ SNSPSLLPHF QRFSPIDGST  420
VPFFIGAAPA SAAPTMENHH HHQFSSVFDG SRLQLCYADA CRHSDQKGKA KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-43	TCP family protein