PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027340807.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 370aa MW: 41146.4 Da PI: 6.5035

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027340807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00013	18	40	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C +Cgk+Fs+ L H ++ H XP_027340807.1 18 ECDICGKVFSSGKALCGHRNRsH 40 7******************9988 PP
2	zf-C2H2	15.6	4.5e-05	305	327	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ CgksF++ L H + H XP_027340807.1 305 YKCHTCGKSFTTFQGLGGHRSIH 327 9***********99998888777 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MAYDDEVAVD NSDPTSCECD ICGKVFSSGK ALCGHRNRSH TQASKKHQKR VITRLFNDSK 60 SSDMHKRVNH AYDVDPLVCG GKPTCYLCKR DFLSKNALFG HMRSHPKRQW KGVCPPIHSH 120 RHSSSTFSDS PSHYYGSMKD TIEQDDGSDD DDDDDDDDDD DDCVSEDEDH IDVTDLLKLT 180 SPSWLKTDKR GRSSIGAYAA AETLVLICSH ARSLCGESSS RLSLKEASVK PNSTSHVPTP 240 SKKRKIGESS LNERLMVKKI KVYHGQVLNK DNGEEEARKS EKLVLKSKDK GSMYENESRE 300 KLGGYKCHTC GKSFTTFQGL GGHRSIHRGK NIVGAYATTD EENDSYYSDC APKMDVALLS 360 EETSEDDASQ

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MAYDDEVAVD NSDPTSCECD ICGKVFSSGK ALCGHRNRSH TQASKKHQKR VITRLFNDSK  60
SSDMHKRVNH AYDVDPLVCG GKPTCYLCKR DFLSKNALFG HMRSHPKRQW KGVCPPIHSH  120
RHSSSTFSDS PSHYYGSMKD TIEQDDGSDD DDDDDDDDDD DDCVSEDEDH IDVTDLLKLT  180
SPSWLKTDKR GRSSIGAYAA AETLVLICSH ARSLCGESSS RLSLKEASVK PNSTSHVPTP  240
SKKRKIGESS LNERLMVKKI KVYHGQVLNK DNGEEEARKS EKLVLKSKDK GSMYENESRE  300
KLGGYKCHTC GKSFTTFQGL GGHRSIHRGK NIVGAYATTD EENDSYYSDC APKMDVALLS  360
EETSEDDASQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26940.1	6e-10	C2H2 family protein