PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027340742.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 767aa    MW: 83245.4 Da    PI: 5.8682
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027340742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.7e-2096151156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_027340742.1  96 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 151
                     688999***********************************************999 PP
2START216.59.2e-682885081206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+ +a+ +ep+W +      + +n++e++++f+++ +     ++ ea+r+++vv+m++ +lve+l+d++ qW++ +     +a+tl
  XP_027340742.1 288 ELAVAAMEELIGMAQMGEPLWLTTLdgttTLLNEEEYIRSFPRGIGpkpagFKCEASRETAVVIMNHINLVEILMDVN-QWSTVFSgivsRAMTL 381
                     57899********************999999************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+aelq++splvp R+++fvRy++q+g+g+w++vdvS+d+ ++ p    ++R++++pSg+li++++ng+skv+wve+v
  XP_027340742.1 382 EVLSTGvagnynGALQVMTAELQVPSPLVPtRESYFVRYCKQHGEGTWAVVDVSLDNLRPSP----SARCRRRPSGCLIQEMPNGYSKVIWVENV 472
                     ************************************************************99....5**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+w atl+rqce+
  XP_027340742.1 473 EVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCER 508
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 767 aa     Download sequence    
MPAGIMIPAR NMPSMIGRNG NVGGFGLSSG LSLGQVNMFQ PNLMEAGQLH PLDMPQNTSE  60
SDVPRIREDD FDTATKSGSE NQEGASGEDQ DPRPKKKRYH RHTQHQIQEM EAFFKECPHP  120
DDKQRKELSR ELGLEPLQVK FWFQNKRTQM KTQHERHENT QLRSENEKLR ADNMRFREAL  180
SNASCPNCGG PTAIGEMSFD EHHLRLENAR LREEIDRISA IAAKYVGKPV VSYPLLSPSS  240
VPPRPLELGI GGFGGQPGIG GGDIYGGAGD LLRPVSGPTE ADKPIIIELA VAAMEELIGM  300
AQMGEPLWLT TLDGTTTLLN EEEYIRSFPR GIGPKPAGFK CEASRETAVV IMNHINLVEI  360
LMDVNQWSTV FSGIVSRAMT LEVLSTGVAG NYNGALQVMT AELQVPSPLV PTRESYFVRY  420
CKQHGEGTWA VVDVSLDNLR PSPSARCRRR PSGCLIQEMP NGYSKVIWVE NVEVDDRGVH  480
NLYKQLVSSG HAFGAKRWIA TLDRQCERLA SAMATNVPTV DVGVITNQDG RKSMLKLAER  540
MVISFCAGVS ASTAHTWTTL SGTGADDVRV MTRKSVDDPG RPPGIVLSAA TSFWLPVSPK  600
RVFEFLRDEN SRSEWDILSN GGVVQEMAHI ANGRDTGNCV SLLRVNSANS SQSNMLILQE  660
SCTDTTGSFV IYAPVDIVAM NVVLNGGDPD YVALLPSGFA ILPDGTTTHG GGIGDTGHGG  720
SLLTVAFQIL VDSVPTAKLS LGSVATVNNL IACTVERIKA SLSGEVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein