PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027340514.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 333aa MW: 37909 Da PI: 8.1904

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027340514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.7	7.6e-15	47	106	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg + ++ Aa+a++ a++k++g XP_027340514.1 47 SIYRGVTRHRWTGRYEAHLWDkTCWNEsqtKKgRQVYLGAYNDEDAAARAYDLAALKYWG 106 57*****************999977778557******99***********98 PP
2	AP2	53.1	7.8e-17	149	201	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g+ XP_027340514.1 149 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAIEYRGH 201 89**99******99966...3.6************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MAYDRVILIG LFGMSQENNT NAPNTNTNKV KRSRKTNPRH SPSQRSSIYR GVTRHRWTGR 60 YEAHLWDKTC WNESQTKKGR QVYLGAYNDE DAAARAYDLA ALKYWGQDTI LNFPLSNYQD 120 ELKEMEDQSK EEYIGSLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV FGNKYLYLGT 180 YATQEEAAMA YDMAAIEYRG HNAVTNFDLS RYIKWLHPNT QDEDKRKTPS KTDPELGTNE 240 ITTAATPLSG NGTTATTTSS ALGLLLQSSK FKEMLQRTSA EDYPPPPPPR TFPDDIQTFF 300 ENHDSGIYAE TDDIIFGDLT SIASPFFHCE LNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-111	AP2 family protein