PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027340339.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GATA
Protein Properties Length: 325aa    MW: 35994.5 Da    PI: 8.2856
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027340339.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.49.4e-19239272134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  XP_027340339.1 239 CMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGR 272
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MSEDIAKMKD SWFFDNNFNG LSDEIFDDVI KFFDFPLEDV ETNAAEEDWD AQLKSLDDPR  60
FDVFSVSSAG LCAKTQDENP QLGMGFSASC NGISPIKQLA KAPGPTYEKT ISHQTVSFNG  120
KDLHQFQTYS PVSVFESSSS SSVENSNFDV PVILRKRARS KRMRPSSSNP LFSTPFVLSS  180
PDLLKHQRTT ASESNFEKDV AGKLSDKVKR LRKKDMSLLS GDVGTTKSSL LESVAFRKCM  240
HCEVTKTPQW REGPMGPKTL CNACGVRYRS GRLFPEYRPA ASPTFVASLH SNCHKKVVEM  300
RSRTMHEGVR GSVLASSNLS GNSVG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154160LRKRARS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.24e-47GATA family protein