PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027340130.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 803aa    MW: 89342.9 Da    PI: 6.7
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027340130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.84.7e-24163264199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F   + ++
  XP_027340130.1 163 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGEN 254
                     99****************************963.3445679************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+++++r+
  XP_027340130.1 255 GELRLGIRRA 264
                     999****996 PP
2Auxin_resp119.82.1e-39289371182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsL 82 
                     +a+a+s ks+F+v+Y+Pras+++Fvv+++k++k++k++v++G+Rfkm+fe+++s+err+ sG+v+g+sd+dp++Wp+SkWr+L
  XP_027340130.1 289 VANAISAKSMFHVFYSPRASHADFVVSYQKYVKSIKNPVTIGTRFKMKFEMDESPERRCtSGVVTGMSDMDPYKWPKSKWRCL 371
                     689********************************************************9**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 803 aa     Download sequence    
MEIDLNDDAG TEVEKNASCN GVCEKGVTCA CSLSSSTSGS SSARMSSSYL ELWHACAGPQ  60
TSLPKKGNVV VYFPQGHLEQ AASFSAFTPM EMPTYDLQPQ IFCRVVNVQL LANKENDEVY  120
TQVTLLPQTE LAGMYLEGKE LEELEEDEEG NGTTPTKSTP HMFCKTLTAS DTSTHGGFSV  180
PRRAAEDCFP PLDYKQQRPS QELVAKDLHG VEWKFRHIYR GQPRRHLLTT GWSIFVSQKN  240
LVSGDAVLFL RGENGELRLG IRRAARPKNG LPESIVGSQS CYPNFLSSVA NAISAKSMFH  300
VFYSPRASHA DFVVSYQKYV KSIKNPVTIG TRFKMKFEMD ESPERRCTSG VVTGMSDMDP  360
YKWPKSKWRC LMVRWDEDIE INHQDRVSPW EIDPSVSLPP MSIQSSRRLK KLRPGLQAAS  420
PSHLITAGGS GFMDFEESVR SPKVLQGQEN TGFMSLYYGC DTVTKQPEFE IRSPSHPNLL  480
STGMRKIAAA ELMKVHPSSY AGFTETNRFP RVLQGQEICP LRSLTGKVDL NLGAWGKPSV  540
SCTNYNLHQA TKPNFHSLGP EVVQTAYFPY SDIHKTGQGS SMLCSKPTNF QRENLPFHTP  600
STQSGIMRNE VGRSDVTIPN EQRLQDNISS AASLGANMRI SNEDNFEGKV NACKLFGFPL  660
YGETTTQNLQ NSAKRSCTKV HKQGSLVGRA IDLSRLSSYN DLLIELERLF SMEGLLRDPS  720
KGWRILYTDS ENDIMVVGDD PWHEFCDVVS KIHIHTQEEV EKMTIGMTND DTQSCLEQAP  780
LIMEASKSSS VGQPDSSPTV VRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.10.0ARF family protein