PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027340091.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 481aa MW: 52418.7 Da PI: 8.6727

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027340091.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	2.9e-05	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_027340091.1 90 FICEICNKGFQRDQNLQLHRRGH 112 89*******************88 PP
2	zf-C2H2	12.2	0.00056	166	188	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_027340091.1 166 WKCDKCSKKYAVQSDWKAHSKTC 188 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MKGLVFQQQP QQLPLVEENM SNLTSASGEA SASSGNRNEI VTDYSQQYFA PPSTQTQPQV 60 KKKRNLPGNP DPEAEVVALS PKTLLATNRF ICEICNKGFQ RDQNLQLHRR GHNLPWKLKQ 120 RTNKEIRKKV YVCPEPTCVH HDPSRALGDL TGIKKHFCRK HGEKKWKCDK CSKKYAVQSD 180 WKAHSKTCGT REYRCDCGTL FSSFRRDSFI THRAFCDALA EESARAVTGI GNPLHHPSPT 240 PQPQPVNLED MHGFPLKKEQ QSFIPPWLAP PTVDLSSSSS SFFTTPRLDQ VQDHENPNPR 300 LGPTLPAFQP APSSPHMSAT ALLQKAAQMG ATMSKTGSMI RTHQHTHVSA DSSFNLSSRD 360 DQIMTTTNHA LAPYAHKAAS AGDATGGGSG GGGVPSSLLH HVIDSFSSPF EGTSFEDAFA 420 GHGAIAKTTA ADDGSAGGSE GLTRDFLGLR PLSHTDILNI AGIGNCMNSS QHNQSQKPWQ 480 G

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MKGLVFQQQP QQLPLVEENM SNLTSASGEA SASSGNRNEI VTDYSQQYFA PPSTQTQPQV  60
KKKRNLPGNP DPEAEVVALS PKTLLATNRF ICEICNKGFQ RDQNLQLHRR GHNLPWKLKQ  120
RTNKEIRKKV YVCPEPTCVH HDPSRALGDL TGIKKHFCRK HGEKKWKCDK CSKKYAVQSD  180
WKAHSKTCGT REYRCDCGTL FSSFRRDSFI THRAFCDALA EESARAVTGI GNPLHHPSPT  240
PQPQPVNLED MHGFPLKKEQ QSFIPPWLAP PTVDLSSSSS SFFTTPRLDQ VQDHENPNPR  300
LGPTLPAFQP APSSPHMSAT ALLQKAAQMG ATMSKTGSMI RTHQHTHVSA DSSFNLSSRD  360
DQIMTTTNHA LAPYAHKAAS AGDATGGGSG GGGVPSSLLH HVIDSFSSPF EGTSFEDAFA  420
GHGAIAKTTA ADDGSAGGSE GLTRDFLGLR PLSHTDILNI AGIGNCMNSS QHNQSQKPWQ  480
G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	129	KLKQRTNKEIRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-109	C2H2 family protein