PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339808.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 1058aa MW: 116551 Da PI: 6.4535

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71	1.6e-22	135	236	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae++ +++ + +l+ +d++++ W++++iyr+k++r++lt+GW+ Fv+ ++L +gD+v+F +++ XP_027339808.1 135 FCKQLTASDTSTHGGFSVPRRAAEKIfppldycVEPPVQ--ELVARDLHNNIWRFRHIYRGKPKRHLLTTGWSLFVSGKRLLAGDSVLFV--RDE 225 99**************************988555555..8********************************************..568 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++l+++++r+ XP_027339808.1 226 KQQLLLGIRRA 236 8889**997 PP
2	Auxin_resp	22.1	6.4e-09	278	303	58	83
Auxin_resp 58 rlsGtvvgvsdldpvrWpnSkWrsLk 83 r++Gt+vgvsdld+vrW+nS W +L+ XP_027339808.1 278 RYMGTIVGVSDLDSVRWKNSLWHNLQ 303 68*********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1058 aa Download sequence
MSTDSTAMNT QPDAAAPNLG EGGERRSINP ELWQACAGPL RNLPSPGTHV VYFPQGHSEQ 60 VAASLKQDVD AQIPNYPNLP SKLPCLLHNV TLHADPETDE VYAQMTLQPV QSFDADALLR 120 SDLSLKSSKP QPEFFCKQLT ASDTSTHGGF SVPRRAAEKI FPPLDYCVEP PVQELVARDL 180 HNNIWRFRHI YRGKPKRHLL TTGWSLFVSG KRLLAGDSVL FVRDEKQQLL LGIRRANRQP 240 INISSSVLSS DSMHIGILAA AAHAVANNSP FTVFYNPRYM GTIVGVSDLD SVRWKNSLWH 300 NLQVGWDDAT AGERQSRVSI WEIEPVTAPY FICPPPFFRP KRPRLPGMLD DEPSDFNNLF 360 KSTMPWVGDD MCINDSQALP GLSLVQWMSI QQNPAPANSF QSNYVPSMAG LVLQNLPSAD 420 TSNQLGFSTS QISQSNNLSF DAQKILQTSQ QHDHIQKLPS TSPPQQPRNL MSQTLPQSEV 480 HTQLLNPQSL VQTNNILQQQ QSSSQNHQLL RGLSQNPPQQ HQVTTMGQNQ LQNSIQSPMP 540 DYVNHQLQMS DNQVQLQLLQ KLQQQQQTLL AKQSALQQPA QLIQIPDQQR KLLDVAHNSR 600 ALTPGQVLEI PPTLQNSLPE ARSLTPQITM PSSQKNVQLS NLSKQPGLLS EISGHVGLPP 660 TATTNLHSAS GCSILTGAGQ SVITDDVPSC STSPSSNNFA NALPPVISSQ IHRRTMVEDD 720 MALSAVTILS PSVLETMSSN ANMVKDVHSK YEVKPSLNIS KHQTQGNFAP KAYLNGGVQT 780 DYLDSSSSAT SVFLFQSDTH MHQNNNPLSY NPQSMHCRDN TQNLDVQADS RTNIPYGNHI 840 NGQMEMSPNL DPLLTKGTMG LGKDLPNTIS SGGLLGDYEN NKDAPELSSS MVSHAFGVLD 900 MSFNSIDSTI NSSSFLNSGP RNPPSLPLPP PLLPPPSQQH QFQRKRTYTK VYKRGAVGRS 960 VDITRYSGYE ELKQDLALRF GIEGQLEDRQ RIGWKLVYVD HENDVLLVGD DPWEEFVNCV 1020 RCIKILSPQE VQQMSLDGDF SNGGLPYPAG SSSDGGNT

Sequence ? help Back to Top

Protein Sequence Length: 1058 aa Download sequence

MSTDSTAMNT QPDAAAPNLG EGGERRSINP ELWQACAGPL RNLPSPGTHV VYFPQGHSEQ  60
VAASLKQDVD AQIPNYPNLP SKLPCLLHNV TLHADPETDE VYAQMTLQPV QSFDADALLR  120
SDLSLKSSKP QPEFFCKQLT ASDTSTHGGF SVPRRAAEKI FPPLDYCVEP PVQELVARDL  180
HNNIWRFRHI YRGKPKRHLL TTGWSLFVSG KRLLAGDSVL FVRDEKQQLL LGIRRANRQP  240
INISSSVLSS DSMHIGILAA AAHAVANNSP FTVFYNPRYM GTIVGVSDLD SVRWKNSLWH  300
NLQVGWDDAT AGERQSRVSI WEIEPVTAPY FICPPPFFRP KRPRLPGMLD DEPSDFNNLF  360
KSTMPWVGDD MCINDSQALP GLSLVQWMSI QQNPAPANSF QSNYVPSMAG LVLQNLPSAD  420
TSNQLGFSTS QISQSNNLSF DAQKILQTSQ QHDHIQKLPS TSPPQQPRNL MSQTLPQSEV  480
HTQLLNPQSL VQTNNILQQQ QSSSQNHQLL RGLSQNPPQQ HQVTTMGQNQ LQNSIQSPMP  540
DYVNHQLQMS DNQVQLQLLQ KLQQQQQTLL AKQSALQQPA QLIQIPDQQR KLLDVAHNSR  600
ALTPGQVLEI PPTLQNSLPE ARSLTPQITM PSSQKNVQLS NLSKQPGLLS EISGHVGLPP  660
TATTNLHSAS GCSILTGAGQ SVITDDVPSC STSPSSNNFA NALPPVISSQ IHRRTMVEDD  720
MALSAVTILS PSVLETMSSN ANMVKDVHSK YEVKPSLNIS KHQTQGNFAP KAYLNGGVQT  780
DYLDSSSSAT SVFLFQSDTH MHQNNNPLSY NPQSMHCRDN TQNLDVQADS RTNIPYGNHI  840
NGQMEMSPNL DPLLTKGTMG LGKDLPNTIS SGGLLGDYEN NKDAPELSSS MVSHAFGVLD  900
MSFNSIDSTI NSSSFLNSGP RNPPSLPLPP PLLPPPSQQH QFQRKRTYTK VYKRGAVGRS  960
VDITRYSGYE ELKQDLALRF GIEGQLEDRQ RIGWKLVYVD HENDVLLVGD DPWEEFVNCV  1020
RCIKILSPQE VQQMSLDGDF SNGGLPYPAG SSSDGGNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	1e-154	ARF family protein