PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339807.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 1099aa MW: 121349 Da PI: 6.5643

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.9	1.6e-22	135	236	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae++ +++ + +l+ +d++++ W++++iyr+k++r++lt+GW+ Fv+ ++L +gD+v+F +++ XP_027339807.1 135 FCKQLTASDTSTHGGFSVPRRAAEKIfppldycVEPPVQ--ELVARDLHNNIWRFRHIYRGKPKRHLLTTGWSLFVSGKRLLAGDSVLFV--RDE 225 99**************************988555555..8********************************************..568 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++l+++++r+ XP_027339807.1 226 KQQLLLGIRRA 236 8889**997 PP
2	Auxin_resp	113.2	2.5e-37	261	344	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha++++s+F+v+YnPras+seFv++++k+ ka++ +s+GmRf+m feteds +rr++Gt+vgvsdld+vrW+nS W +L+ XP_027339807.1 261 AAHAVANNSPFTVFYNPRASPSEFVIPLAKYYKAVYsYYISPGMRFRMTFETEDSGTRRYMGTIVGVSDLDSVRWKNSLWHNLQ 344 79*******************************97889***************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1099 aa Download sequence
MSTDSTAMNT QPDAAAPNLG EGGERRSINP ELWQACAGPL RNLPSPGTHV VYFPQGHSEQ 60 VAASLKQDVD AQIPNYPNLP SKLPCLLHNV TLHADPETDE VYAQMTLQPV QSFDADALLR 120 SDLSLKSSKP QPEFFCKQLT ASDTSTHGGF SVPRRAAEKI FPPLDYCVEP PVQELVARDL 180 HNNIWRFRHI YRGKPKRHLL TTGWSLFVSG KRLLAGDSVL FVRDEKQQLL LGIRRANRQP 240 INISSSVLSS DSMHIGILAA AAHAVANNSP FTVFYNPRAS PSEFVIPLAK YYKAVYSYYI 300 SPGMRFRMTF ETEDSGTRRY MGTIVGVSDL DSVRWKNSLW HNLQVGWDDA TAGERQSRVS 360 IWEIEPVTAP YFICPPPFFR PKRPRLPGML DDEPSDFNNL FKSTMPWVGD DMCINDSQAL 420 PGLSLVQWMS IQQNPAPANS FQSNYVPSMA GLVLQNLPSA DTSNQLGFST SQISQSNNLS 480 FDAQKILQTS QQHDHIQKLP STSPPQQPRN LMSQTLPQSE VHTQLLNPQS LVQTNNILQQ 540 QQSSSQNHQL LRGLSQNPPQ QHQVTTMGQN QLQNSIQSPM PDYVNHQLQM SDNQVQLQLL 600 QKLQQQQQTL LAKQSALQQP AQLIQIPDQQ RKLLDVAHNS RALTPGQVLE IPPTLQNSLP 660 EARSLTPQIT MPSSQKNVQL SNLSKQPGLL SEISGHVGLP PTATTNLHSA SGCSILTGAG 720 QSVITDDVPS CSTSPSSNNF ANALPPVISS QIHRRTMVED DMALSAVTIL SPSVLETMSS 780 NANMVKDVHS KYEVKPSLNI SKHQTQGNFA PKAYLNGGVQ TDYLDSSSSA TSVFLFQSDT 840 HMHQNNNPLS YNPQSMHCRD NTQNLDVQAD SRTNIPYGNH INGQMEMSPN LDPLLTKGTM 900 GLGKDLPNTI SSGGLLGDYE NNKDAPELSS SMVSHAFGVL DMSFNSIDST INSSSFLNSG 960 PRNPPSLPLP PPLLPPPSQQ HQFQRKRTYT KVYKRGAVGR SVDITRYSGY EELKQDLALR 1020 FGIEGQLEDR QRIGWKLVYV DHENDVLLVG DDPWEEFVNC VRCIKILSPQ EVQQMSLDGD 1080 FSNGGLPYPA GSSSDGGNT

Sequence ? help Back to Top

Protein Sequence Length: 1099 aa Download sequence

MSTDSTAMNT QPDAAAPNLG EGGERRSINP ELWQACAGPL RNLPSPGTHV VYFPQGHSEQ  60
VAASLKQDVD AQIPNYPNLP SKLPCLLHNV TLHADPETDE VYAQMTLQPV QSFDADALLR  120
SDLSLKSSKP QPEFFCKQLT ASDTSTHGGF SVPRRAAEKI FPPLDYCVEP PVQELVARDL  180
HNNIWRFRHI YRGKPKRHLL TTGWSLFVSG KRLLAGDSVL FVRDEKQQLL LGIRRANRQP  240
INISSSVLSS DSMHIGILAA AAHAVANNSP FTVFYNPRAS PSEFVIPLAK YYKAVYSYYI  300
SPGMRFRMTF ETEDSGTRRY MGTIVGVSDL DSVRWKNSLW HNLQVGWDDA TAGERQSRVS  360
IWEIEPVTAP YFICPPPFFR PKRPRLPGML DDEPSDFNNL FKSTMPWVGD DMCINDSQAL  420
PGLSLVQWMS IQQNPAPANS FQSNYVPSMA GLVLQNLPSA DTSNQLGFST SQISQSNNLS  480
FDAQKILQTS QQHDHIQKLP STSPPQQPRN LMSQTLPQSE VHTQLLNPQS LVQTNNILQQ  540
QQSSSQNHQL LRGLSQNPPQ QHQVTTMGQN QLQNSIQSPM PDYVNHQLQM SDNQVQLQLL  600
QKLQQQQQTL LAKQSALQQP AQLIQIPDQQ RKLLDVAHNS RALTPGQVLE IPPTLQNSLP  660
EARSLTPQIT MPSSQKNVQL SNLSKQPGLL SEISGHVGLP PTATTNLHSA SGCSILTGAG  720
QSVITDDVPS CSTSPSSNNF ANALPPVISS QIHRRTMVED DMALSAVTIL SPSVLETMSS  780
NANMVKDVHS KYEVKPSLNI SKHQTQGNFA PKAYLNGGVQ TDYLDSSSSA TSVFLFQSDT  840
HMHQNNNPLS YNPQSMHCRD NTQNLDVQAD SRTNIPYGNH INGQMEMSPN LDPLLTKGTM  900
GLGKDLPNTI SSGGLLGDYE NNKDAPELSS SMVSHAFGVL DMSFNSIDST INSSSFLNSG  960
PRNPPSLPLP PPLLPPPSQQ HQFQRKRTYT KVYKRGAVGR SVDITRYSGY EELKQDLALR  1020
FGIEGQLEDR QRIGWKLVYV DHENDVLLVG DDPWEEFVNC VRCIKILSPQ EVQQMSLDGD  1080
FSNGGLPYPA GSSSDGGNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein