PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339768.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 489aa    MW: 55659.6 Da    PI: 4.9901
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS271.82.1e-831184762371
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dp.mqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      +lLl+ Aeav++++  la++++++l++ +s +  d+ ++Rla +f+++L  + ++     ++ +++s+   ++++++l ++++++e+sP++kf+
  XP_027339768.1 118 ADLLLTGAEAVEAQNWVLASEIIEKLNNSSSLENgDSiLNRLALFFAKGLCYKSTN---ANASEFQCSSV--STQTNALCVFQILQELSPYVKFA 207
                     679**************************88765465279**********998888...44444555555..46899999*************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     h+taNqaIlea+eg+e vHiiDfdi++G+QWp+L+  La R++ + slR+T++ + ++  + ++++tg+rL++fA++++ pf f+ ++++r ed+
  XP_027339768.1 208 HFTANQAILEATEGAEDVHIIDFDIMEGIQWPPLMVDLAMRKRTTTSLRVTAITA-DQRGAASVQQTGRRLKEFAASINFPFTFDQIMMTREEDF 301
                     *******************************************************.557899*************************99999999 PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalfdsleaklpres. 279
                     +  eL    g +l+Vn+++  + ++++s  l +   ++L+ v++lsPk+vv+ve+e    + + s sF+e f+eal++y+al+dsl+++l   + 
  XP_027339768.1 302 QRVEL----GQTLIVNCMI-HQWMPNRSFLLVK---TFLDGVRKLSPKLVVLVEEElfnfSRLKSMSFVEFFCEALHHYTALYDSLASSLWGSHk 388
                     88777....9********9.4556677777777...9*******************8775556999********************888766662 PP

            GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                      + + +E+e+lg +i + v +   er+er      W+e l +  GFk v++s+ + +qak l++ ++  gy v+ e+g l l+Wk+rpL+++S
  XP_027339768.1 389 MKLTLIEKEILGLRILDSVRQFPCERKERIL----WEEGLYSlKGFKRVAMSTCNISQAKFLVSLFG-GGYWVQFEKGRLALCWKSRPLTTAS 476
                     666789*******************999998....***987658***********************.89*********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
MNMMDYEQFD YSFSPPYLNQ LHECNLENAF SFQTEDLSSP STILDEIFYE ESMEGLLQQH  60
TKNQDFGFMN HDKTMGLGNQ LCHGVTPKAR ENVHVSSEEE GSYLKGIQEE LMEDTSLADL  120
LLTGAEAVEA QNWVLASEII EKLNNSSSLE NGDSILNRLA LFFAKGLCYK STNANASEFQ  180
CSSVSTQTNA LCVFQILQEL SPYVKFAHFT ANQAILEATE GAEDVHIIDF DIMEGIQWPP  240
LMVDLAMRKR TTTSLRVTAI TADQRGAASV QQTGRRLKEF AASINFPFTF DQIMMTREED  300
FQRVELGQTL IVNCMIHQWM PNRSFLLVKT FLDGVRKLSP KLVVLVEEEL FNFSRLKSMS  360
FVEFFCEALH HYTALYDSLA SSLWGSHKMK LTLIEKEILG LRILDSVRQF PCERKERILW  420
EEGLYSLKGF KRVAMSTCNI SQAKFLVSLF GGGYWVQFEK GRLALCWKSR PLTTASILVP  480
TTYLSDKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.15e-48GRAS family protein