PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027339762.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ARF | ||||||||
Protein Properties | Length: 805aa MW: 89447.6 Da PI: 7.0501 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 77.6 | 1.4e-24 | 31 | 132 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F +++ XP_027339762.1 31 FCKILTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 121 99*****************************8544444..48************************************************..889 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +l+++++r+ XP_027339762.1 122 KNQLLLGIRRA 132 9999****997 PP | |||||||
2 | Auxin_resp | 119.3 | 3.1e-39 | 157 | 240 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k XP_027339762.1 157 AAHAAATNSRFTIFYNPRASPSEFVISLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 240 79*********************************9789******************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 805 aa Download sequence |
MTLQPLSPQE QKEAYLPAEL GTPSKQPTNY FCKILTASDT STHGGFSVPR RAAEKVFPPL 60 DFSQQPPAQE LIARDLHGNE WKFRHIFRGQ PKRHLLTTGW SVFVSAKRLV AGDSVLFIWN 120 EKNQLLLGIR RANRPQPVMP SSVLSSDSMH LGLLAAAAHA AATNSRFTIF YNPRASPSEF 180 VISLAKYVKA VYHTRVSVGM RFRMLFETEE SSVRRYMGTI TGISDLDSVR WPNSHWRSVK 240 VGWDESTAGE RQPRVSLWEI EPLTTFPMYP SPFPFRLKRP WPPGMPSFHA GLKDDDFGIN 300 SPLLWLRDPD RGLQSLPFQG VGVSPWMQPR HPSMVNLQTD MYQAMAAAAL QDMRTLDPSK 360 QHATSLLQFQ QPQNFPNRTS ALMQTQMLQQ SQHQQAFPNS QENPHPSQSQ AQTHTHFQQH 420 LQHQHSFNNQ NQHHLLQQQQ QPQPQQVIDH QQISSAVSTM SQFVSAPQSQ SPPMQAISSL 480 GHQQSFSDSN GNPATTAIVS PLHSILSSFP QDEPSHLLNL PRTSSWVPVQ PSGAWPSKRI 540 ALDPLLSSGA SQCVLPQVEQ LGQPQSTISQ NAITLPPFPG RECAIEGSND PQNHLLFGVN 600 IEPSSLLVHN GMSSLKGVSS NSDSPTIPFQ SSNYLNTTGT DSSLNPGMTP NIGELGFLPT 660 PDNGGQGNPP TKTFVKVYKS GSFGRSLDIT KFTSYHELRS ELARMFGLEG ELEDPVRSGW 720 QLVFVDQEND VLLLGDGPWP EFVNSVWCIK ILSPQEVQQM GHNGLELLNS VPIQRLSDGI 780 CDDYTGREDP RNLSTGVTTV GSLNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30330.1 | 0.0 | ARF family protein |