PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339471.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 492aa    MW: 54456.9 Da    PI: 5.5988
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS330.43.4e-1011064861374
            GRAS   1 lvelLlecAeavss..gdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalpp.setsekn.......sseelaalklf 84 
                     lv+lL+++Ae ++   ++  la+ +L rl+el +  +g++m+Rlaayft AL+  l + +    +  ++  +  +++       + + laa++l+
  XP_027339471.1 106 LVHLLMAAAESLTGatKSRDLARVILVRLKELvSHAHGSNMERLAAYFTDALQGLLEGAGGAHNNNKNCcITGGPHHrddqyhhQNDMLAAFQLL 200
                     689********986336666************455567******************98543333322221111111122345679999******* PP

            GRAS  85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfe 177
                     +++sP++kf+h+taNqaIleav++e+rvHi+D+di++G+QW++L+qaLas ++g p+lRiT++++  +g  s  +++etg+rL+ fA++lg pf+
  XP_027339471.1 201 QDMSPYVKFGHFTANQAILEAVAHERRVHIVDYDIMEGVQWASLMQALASNNNG-PHLRITALSRTGTGrkSIATVQETGRRLTAFAASLGQPFS 294
                     **************************************************8766.9*********888798999********************* PP

            GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                     f+    ++ e++++++L+v +gEal+ n++l+l +l  ++ ++ +   ++ +  k l+P++v++ve+e+    + F+ rf+++l++ysa+fdsle
  XP_027339471.1 295 FHQCRLDSDETFRPSTLKVVRGEALVFNCMLNLPHLSYRTPDSVE---SFFSGAKALRPRLVTLVEEEVGSVVGGFVGRFMDSLHHYSAVFDSLE 386
                     ***9999*****************************977666666...9********************************************** PP

            GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrp 366
                     a++p + ++r+ vEr++lg++i   +a   +    ++e  ++W e+l++ GF+ vp+s  + +qaklll+ ++ dgyrvee   + lvl Wk+r+
  XP_027339471.1 387 AGFPMQRRARALVERVFLGPRILGSLARIYRT--GEEEDRGSWGEWLGAEGFSGVPISFANHCQAKLLLSLFN-DGYRVEELgCNKLVLDWKSRR 478
                     ***************************98876..888889*********************************.******98679999******* PP

            GRAS 367 LvsvSaWr 374
                     L+s+S W+
  XP_027339471.1 479 LLSASLWT 486
                     *******6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
MDMDMDTIHD LDFSGYSTIT NTNTPTSDDD YACNWNHWSP LVNWDTFAGS QDDFHHLIDS  60
IVDDALHLSP ENAPTNSATI TEEDDVDEET APPPAPTGDD SKGLRLVHLL MAAAESLTGA  120
TKSRDLARVI LVRLKELVSH AHGSNMERLA AYFTDALQGL LEGAGGAHNN NKNCCITGGP  180
HHRDDQYHHQ NDMLAAFQLL QDMSPYVKFG HFTANQAILE AVAHERRVHI VDYDIMEGVQ  240
WASLMQALAS NNNGPHLRIT ALSRTGTGRK SIATVQETGR RLTAFAASLG QPFSFHQCRL  300
DSDETFRPST LKVVRGEALV FNCMLNLPHL SYRTPDSVES FFSGAKALRP RLVTLVEEEV  360
GSVVGGFVGR FMDSLHHYSA VFDSLEAGFP MQRRARALVE RVFLGPRILG SLARIYRTGE  420
EEDRGSWGEW LGAEGFSGVP ISFANHCQAK LLLSLFNDGY RVEELGCNKL VLDWKSRRLL  480
SASLWTCSSH SD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-150GRAS family protein