PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339308.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 360aa MW: 40700.8 Da PI: 8.1817

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339308.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.9	9.9e-25	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_027339308.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119 79***************************************987 PP
2	QLQ	55.5	1.7e-19	8	42	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT++Q+q+L++Q+l++Ky+a++ +Pp+Ll+ i+ XP_027339308.1 8 PFTPSQWQELEHQALIFKYMASGISIPPDLLFTIK 42 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MNGRNRFPFT PSQWQELEHQ ALIFKYMASG ISIPPDLLFT IKRSYFDSTL SSRLLPNQPQ 60 HFGWNYLQMG LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV 120 LKTTTNSNTN ASSTPAISSI TKNTPTTTHS LSSETHHHPP QHSCYGSSFF YHHPTSRSSG 180 IGLSFEDNSA PLFLDTGSCS QSNTDCRSRY VYGEKEEVDE HAFFTEPCGN MKSFTASSMD 240 DSWQLRPLTM SSSSSSSKQR SCSSLSNDYS YLQLHSKQEQ DQGCYMFGSG GDGDETLIKH 300 GKEPQKTIHR FFDEWPHKGR GGSWLDLDDK SSTTQLSISI PTSSHDFPTF SSSSRSHHDG

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MNGRNRFPFT PSQWQELEHQ ALIFKYMASG ISIPPDLLFT IKRSYFDSTL SSRLLPNQPQ  60
HFGWNYLQMG LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV  120
LKTTTNSNTN ASSTPAISSI TKNTPTTTHS LSSETHHHPP QHSCYGSSFF YHHPTSRSSG  180
IGLSFEDNSA PLFLDTGSCS QSNTDCRSRY VYGEKEEVDE HAFFTEPCGN MKSFTASSMD  240
DSWQLRPLTM SSSSSSSKQR SCSSLSNDYS YLQLHSKQEQ DQGCYMFGSG GDGDETLIKH  300
GKEPQKTIHR FFDEWPHKGR GGSWLDLDDK SSTTQLSISI PTSSHDFPTF SSSSRSHHDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-54	GRF family protein