PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339285.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GATA
Protein Properties Length: 322aa    MW: 36509.5 Da    PI: 9.8407
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.93.3e-19178212135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs C+ttkTplWR+gp g+k+LCnaCG+++rk ++
  XP_027339285.1 178 CSDCQTTKTPLWRSGPKGPKSLCNACGIRQRKARH 212
                     ********************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MFYVYESMTP TDCYSVSSPM PLDLNEDRTH QLFSANHQAS SSSSSLSYSI FFNPDIDQGG  60
SCYWESKHLQ SDEEAKKIIP SSRSWDHPSA EKDERISDLK VMVWKKEDGY ENLQREDSSV  120
KWMPSKMRMM RRMMVSGFDI VGTSKKYEEK KSLLSPQEVY YSSNNSSSNN SNIPVRVCSD  180
CQTTKTPLWR SGPKGPKSLC NACGIRQRKA RHAIAAAANA NGTILMDAKN EKSHVKKGSK  240
FRNKGTKKSK TECTPQLKKK RKLGAKACVD RKRFNTFEDL TISLSKNLAF QQVFPKEEKE  300
AAILLMALSY GLLHGFPSDR YL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1257263LKKKRKL
2258263KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.12e-18GATA family protein