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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027339283.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 351aa MW: 39286.7 Da PI: 4.5509 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.2 | 5.6e-20 | 110 | 159 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdps r r +lg+++taeeAa +++a+ kl+g XP_027339283.1 110 KFRGVRQRP-WGKWAAEIRDPS----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 159 89*******.**********84....34*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MRHIMEPSIL CKHTVHHSVV KKLLSPKKTL TNSIERRVVR ISVSDPDATD SSSDEESHCF 60 LRHRMKRYVN QIEIETAAKN SAAAPRKRPA GDSSSSRRPA KALAATNGRK FRGVRQRPWG 120 KWAAEIRDPS RRVRLWLGTY DTAEEAAMVY DNAAIKLRGP DALTNFITPP QREKSSPEEA 180 VSEQKPEMKV EVTAEASASG YDSGDEQCHN LSSPTSVLQF RSNSSEETTE SQKPVEPEET 240 SEAEETWEVF RECQGETSLF DETGEFFPLE MPACDDLFNF QAPEYPLLFG DEAPQMLGET 300 SPLYLDEDFS DNIVLADSLI DFDKACSPST LCQVDDYFQD ILLGSDPLVA L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 2e-61 | ERF family protein |