PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027339234.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NF-YA | ||||||||
Protein Properties | Length: 220aa MW: 24397.6 Da PI: 9.5007 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 105.4 | 4.9e-33 | 70 | 126 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++Il+RRq+Rakle+++kl +ksrkpylheSRh+hAl+R RgsgGrF XP_027339234.1 70 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-IKSRKPYLHESRHRHALNRVRGSGGRF 126 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MKPFLLFNHP DTEFNVPQAS YNHPMAYTAY PYGDPNFAYG PQAFNEPQMM PQMLGLAPAR 60 VPLPLDLAED GPIYVNAKQY HGILRRRQSR AKLEAQNKLI KSRKPYLHES RHRHALNRVR 120 GSGGRFLSTK KHSQSSAEFV TGAHSTSDPV NMYQKEEDPS ELESHLLMTG DNACLTGDGV 180 DFGQAELMFM GNSSNMAGAP QCSGGSLAFG GRKRRASIVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.1 | 6e-46 | NF-YA family protein |