PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339021.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 1586aa MW: 178965 Da PI: 9.0916

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00043	1470	1495	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C++sF +k +L++H r+ + XP_027339021.1 1470 YRCDieGCTMSFGSKQELVHHKRNiC 1495 99********************9877 PP
2	zf-C2H2	12.8	0.00036	1495	1517	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_027339021.1 1495 CPvkGCGKKFFSHKYLVQHRRVH 1517 9999*****************99 PP
3	zf-C2H2	11.7	0.00078	1553	1579	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_027339021.1 1553 YVCAepGCGQTFRFVSDFSRHKRKtgH 1579 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1586 aa Download sequence
MGASEGNGDV LPWLKSLPVA PEYRPSVAEF RDPIGYIFKI EKEASKYGIC KIIPPFPPSP 60 KKTAIANLNR SLAVTGSTFT TRQQQIGFCP RKARPVQRPV WQSGDHYTFH EFESKAKSFE 120 KTYLKRHTKK GQGPGPLETE ALFWKATLDK PFSVEYANDM PGSAFSPKCP EAGDPGSSLA 180 DTPWNMREVS RANGSLLRFM KEEIPGVTSP MVYVAMLFSW FAWHVEDHDL HSLNYLHMGA 240 GKTWYGVPRD AAVAFEEVVR VHGYGGEINP LVTFAILGEK TTVMSPEVFI RAGVPCCRLV 300 QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK DAAIRRASIN YPPMISHFQL 360 LYDLALALCS RIPASIGTEP RSSRLKDKKK GEGETVIKEL FVQDVLQNND LLHILGKESA 420 VVLLPRSSVD ISVCSKLRVG SQQSINVSNS EELNSSKGFV SDDLVFNRSH GIKQEKSFYS 480 VKDKFSTLCE RNKISSFDVN GNICASTYAL QRETERETSQ GDGFSDRRLF SCVTCGILSF 540 SSVAIVQPKE PAARYLMSAD CSFFNDWVVG SGVSSSKFTI AHEDTTIPEP NSYTGWMKKN 600 AQDGLGAFPV QSAQDASNTE IEKGNTALAL LASAYGNSDS EEDQGDPDIA VDSHESNVIN 660 SNSGRLLSLT PDSHASPMTA LDRVDDISSK SANYEDHMHH RFESILSHDS FDHSSKKQDY 720 DVTSGYTFKN IRTVPNSTSN CSQDSHDAER SLSVNPVVPI DNRSASLVPQ SDEDSSRMHI 780 FCLEHAVEAE LQLRPIGGAH IFLLCHPDYP KIEAEAKLVA EDLGIDYTWK NIAYRHATKE 840 DEERIQSALD SEEAIPGNGD WAVKLGINLF YSANLSRSPL YSKQMPYNSV IYYAFGRSSP 900 TSSPIEPKVY QRRASKQKKV VAGKWCGKVW MSNQIHPLLA TKDSDDVEDE KKLHGWILPD 960 EKIERPESTP KSETTSRKSG RKRKMTLESA RTRKGSFAKK NIASDNSTED KPISQPRRIL 1020 RSKKARCVVR HRAALEGDYG PPRHHRKHRS KQTKCSESDA ASDDSLNDNV RKTKFIENDV 1080 VSNDTVDYDS DWQQREELCG KQVEDTEREA ISEDSMGVGS LQLHRKASKG KHAKYISAED 1140 IISDDQMGNL SQKRQRRIPK SRHDKYHAGK DIMISDDQLE PKMQKQQRRN PKSRQAKYLA 1200 EEEIVSDDQL EGYYRKYQRR APKGRQAKCL AGEDEMSDDQ SEDNFQRQQT SFSRKRQYKG 1260 IDREVKNVIS DDQLLDHFQK QQRKFPKSRQ NKHIDEEVMD DSADNNSHLL RRTPKRKQAK 1320 CMDEDDINSD DEMEDDSHQP PMRALRSKQS KAKTLQQMKQ AKSLQVKNRT SQPVKRGARG 1380 LMKSKAPQQI KQPSHLRNKQ SSNSREFSLY MEEEEEGGPS TRLRKRSTKA QESEGKLKDK 1440 QTKRKRVKNA TAAAKVSAGH AKVKDEEAEY RCDIEGCTMS FGSKQELVHH KRNICPVKGC 1500 GKKFFSHKYL VQHRRVHEDD RPLKCPWKGC KMTFKWAWAR TEHIRVHTGA RPYVCAEPGC 1560 GQTFRFVSDF SRHKRKTGHS AKKSRQ

Sequence ? help Back to Top

Protein Sequence Length: 1586 aa Download sequence

MGASEGNGDV LPWLKSLPVA PEYRPSVAEF RDPIGYIFKI EKEASKYGIC KIIPPFPPSP  60
KKTAIANLNR SLAVTGSTFT TRQQQIGFCP RKARPVQRPV WQSGDHYTFH EFESKAKSFE  120
KTYLKRHTKK GQGPGPLETE ALFWKATLDK PFSVEYANDM PGSAFSPKCP EAGDPGSSLA  180
DTPWNMREVS RANGSLLRFM KEEIPGVTSP MVYVAMLFSW FAWHVEDHDL HSLNYLHMGA  240
GKTWYGVPRD AAVAFEEVVR VHGYGGEINP LVTFAILGEK TTVMSPEVFI RAGVPCCRLV  300
QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK DAAIRRASIN YPPMISHFQL  360
LYDLALALCS RIPASIGTEP RSSRLKDKKK GEGETVIKEL FVQDVLQNND LLHILGKESA  420
VVLLPRSSVD ISVCSKLRVG SQQSINVSNS EELNSSKGFV SDDLVFNRSH GIKQEKSFYS  480
VKDKFSTLCE RNKISSFDVN GNICASTYAL QRETERETSQ GDGFSDRRLF SCVTCGILSF  540
SSVAIVQPKE PAARYLMSAD CSFFNDWVVG SGVSSSKFTI AHEDTTIPEP NSYTGWMKKN  600
AQDGLGAFPV QSAQDASNTE IEKGNTALAL LASAYGNSDS EEDQGDPDIA VDSHESNVIN  660
SNSGRLLSLT PDSHASPMTA LDRVDDISSK SANYEDHMHH RFESILSHDS FDHSSKKQDY  720
DVTSGYTFKN IRTVPNSTSN CSQDSHDAER SLSVNPVVPI DNRSASLVPQ SDEDSSRMHI  780
FCLEHAVEAE LQLRPIGGAH IFLLCHPDYP KIEAEAKLVA EDLGIDYTWK NIAYRHATKE  840
DEERIQSALD SEEAIPGNGD WAVKLGINLF YSANLSRSPL YSKQMPYNSV IYYAFGRSSP  900
TSSPIEPKVY QRRASKQKKV VAGKWCGKVW MSNQIHPLLA TKDSDDVEDE KKLHGWILPD  960
EKIERPESTP KSETTSRKSG RKRKMTLESA RTRKGSFAKK NIASDNSTED KPISQPRRIL  1020
RSKKARCVVR HRAALEGDYG PPRHHRKHRS KQTKCSESDA ASDDSLNDNV RKTKFIENDV  1080
VSNDTVDYDS DWQQREELCG KQVEDTEREA ISEDSMGVGS LQLHRKASKG KHAKYISAED  1140
IISDDQMGNL SQKRQRRIPK SRHDKYHAGK DIMISDDQLE PKMQKQQRRN PKSRQAKYLA  1200
EEEIVSDDQL EGYYRKYQRR APKGRQAKCL AGEDEMSDDQ SEDNFQRQQT SFSRKRQYKG  1260
IDREVKNVIS DDQLLDHFQK QQRKFPKSRQ NKHIDEEVMD DSADNNSHLL RRTPKRKQAK  1320
CMDEDDINSD DEMEDDSHQP PMRALRSKQS KAKTLQQMKQ AKSLQVKNRT SQPVKRGARG  1380
LMKSKAPQQI KQPSHLRNKQ SSNSREFSLY MEEEEEGGPS TRLRKRSTKA QESEGKLKDK  1440
QTKRKRVKNA TAAAKVSAGH AKVKDEEAEY RCDIEGCTMS FGSKQELVHH KRNICPVKGC  1500
GKKFFSHKYL VQHRRVHEDD RPLKCPWKGC KMTFKWAWAR TEHIRVHTGA RPYVCAEPGC  1560
GQTFRFVSDF SRHKRKTGHS AKKSRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1311	1317	RRTPKRK
2	1311	1318	RRTPKRKQ
3	1424	1446	RKRSTKAQESEGKLKDKQTKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein