PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339020.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 1567aa MW: 177235 Da PI: 9.1615

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	1451	1476	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C++sF +k +L++H r+ + XP_027339020.1 1451 YQCDieGCTMSFGSKQELVHHKRNiC 1476 99********************9877 PP
2	zf-C2H2	12.8	0.00035	1476	1498	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_027339020.1 1476 CPvkGCGKKFFSHKYLVQHRRVH 1498 9999*****************99 PP
3	zf-C2H2	11.8	0.00077	1534	1560	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_027339020.1 1534 YVCAepGCGQTFRFVSDFSRHKRKtgH 1560 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1567 aa Download sequence
MGASEGNGDV LPWLKSLPVA PEYRPSVAEF RDPIGYIFKI EKEASKYGIC KIIPPFPPSP 60 KKTAIANLNR SLAVTGSTFT TRQQQIGFCP RKARPVRRSV WQSGDHYTFH EFESKAKSFE 120 KNYLKRHTKK GPGPGPLETE TLFWKATLDK PFSVEYANDM PGSAFSPKCC EAGDPGSSLA 180 DTPWNMREVS RANGSLLRFM KEEIPGVTSP MVYVAMLFSW FAWHVEDHDL HSLNYLHMGA 240 GKTWYGVPRD AAVAFEEVVR VHGYGGEINP LVTFAILGEK TTVMSPEVFI RAGVPCCRLV 300 QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK DAAIRRASIN YPPMVSHFQL 360 LYDLALALCS RIPTSINAEP RSSRLKDKKK GEGETVIKEL FVQDVLQSND LLHILGKESA 420 VVLLPRSSVD ISVCSKLRVG SQQSINVSNS EGMNSSKGFV SDDLVFNRSH GIKQEKIFYS 480 VKDKFTTLCE RNRISSFDVN GNICTSSSKP LQRNTGRETS QGDGLSDQRL FSCVTCGILS 540 FSCVAIVQPK EPAARYLMSA DCSFFNDWVV GSGVSCSKFA FSHEDKTIPE PNTYTGWMKK 600 NDQDGFDDFP VQSGQDALST ERERGNTALA LLASAYGNSD SEEDQDFHAS PMTALDRVDD 660 IPSKSVNYED HMHHRFECNL SHESFDHSSK KQDYDVTSGF TFKNTRTVPN STSNCSQDSH 720 DAERSLSVNP VVPIDNKNVS LVPKSDEDST RMHIFCLEHA VEAELQLRPI GGAHILLLCH 780 PDYPKIEAEA KLVGEDLGID YTWKNIAYRH ATKEDEERIQ SALDSEEAIP GNGDWAVKLG 840 INLFYSANLS RSPLYSKQMP YNSVIYYAFG RSSPTSSPIE PKVYQRRSSK QKKVVAGKWC 900 GKVWMSNQIH PLLAKKDSDD FEDEKRLHGW ILPDEKIERP ESNPKSETTS RKSGRKRKIT 960 GESARTRKGS LAKKNIASDN STEDKPNSQP RRILRSKKSR CVERDRAALE VGYAPPHHRR 1020 KPIRKQTKCS ESDAASYDSL NDNDHMQHWR NDIVGKTKFI DNDVVSNDTV NYDSDWQQMG 1080 ELSRKQVEDT DRDAISEDSL GVGSLQLRRK TSKGKHAKNI GQEDIISDDQ MENLSQKGKR 1140 KIPKSRHDKY LAGKDVMISD DQLELKMQKQ QQRNPKSRQA KYLAEEDIVS DDQLEGYYRK 1200 YQRRAPKGKQ AKCVAGEDEM SDDQSEDNCQ RQQTSFSGKR QYKGIDREVK NVISDDQLLD 1260 HFQKQQRKFS KSRQNKHINE EVMDDSADNN SHLLRRTPKR RQAKCMDEDD INSDDEMEDD 1320 SHQPPMRALR SKQSKAKTLQ QMKQAKSIQV KNRTSRRGAR VLMKSKAPQQ IKQPSHLQNK 1380 QSSNSREFSL YMEEEEEGGP STRLRKRSAK AQESEGKVKD KQTKRKRVKN ATAAAKVSAG 1440 HAKVKDEEAE YQCDIEGCTM SFGSKQELVH HKRNICPVKG CGKKFFSHKY LVQHRRVHED 1500 DRPLKCPWKG CKMTFKWAWA RTEHIRVHTG ARPYVCAEPG CGQTFRFVSD FSRHKRKTGH 1560 SAKKSRQ

Sequence ? help Back to Top

Protein Sequence Length: 1567 aa Download sequence

MGASEGNGDV LPWLKSLPVA PEYRPSVAEF RDPIGYIFKI EKEASKYGIC KIIPPFPPSP  60
KKTAIANLNR SLAVTGSTFT TRQQQIGFCP RKARPVRRSV WQSGDHYTFH EFESKAKSFE  120
KNYLKRHTKK GPGPGPLETE TLFWKATLDK PFSVEYANDM PGSAFSPKCC EAGDPGSSLA  180
DTPWNMREVS RANGSLLRFM KEEIPGVTSP MVYVAMLFSW FAWHVEDHDL HSLNYLHMGA  240
GKTWYGVPRD AAVAFEEVVR VHGYGGEINP LVTFAILGEK TTVMSPEVFI RAGVPCCRLV  300
QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK DAAIRRASIN YPPMVSHFQL  360
LYDLALALCS RIPTSINAEP RSSRLKDKKK GEGETVIKEL FVQDVLQSND LLHILGKESA  420
VVLLPRSSVD ISVCSKLRVG SQQSINVSNS EGMNSSKGFV SDDLVFNRSH GIKQEKIFYS  480
VKDKFTTLCE RNRISSFDVN GNICTSSSKP LQRNTGRETS QGDGLSDQRL FSCVTCGILS  540
FSCVAIVQPK EPAARYLMSA DCSFFNDWVV GSGVSCSKFA FSHEDKTIPE PNTYTGWMKK  600
NDQDGFDDFP VQSGQDALST ERERGNTALA LLASAYGNSD SEEDQDFHAS PMTALDRVDD  660
IPSKSVNYED HMHHRFECNL SHESFDHSSK KQDYDVTSGF TFKNTRTVPN STSNCSQDSH  720
DAERSLSVNP VVPIDNKNVS LVPKSDEDST RMHIFCLEHA VEAELQLRPI GGAHILLLCH  780
PDYPKIEAEA KLVGEDLGID YTWKNIAYRH ATKEDEERIQ SALDSEEAIP GNGDWAVKLG  840
INLFYSANLS RSPLYSKQMP YNSVIYYAFG RSSPTSSPIE PKVYQRRSSK QKKVVAGKWC  900
GKVWMSNQIH PLLAKKDSDD FEDEKRLHGW ILPDEKIERP ESNPKSETTS RKSGRKRKIT  960
GESARTRKGS LAKKNIASDN STEDKPNSQP RRILRSKKSR CVERDRAALE VGYAPPHHRR  1020
KPIRKQTKCS ESDAASYDSL NDNDHMQHWR NDIVGKTKFI DNDVVSNDTV NYDSDWQQMG  1080
ELSRKQVEDT DRDAISEDSL GVGSLQLRRK TSKGKHAKNI GQEDIISDDQ MENLSQKGKR  1140
KIPKSRHDKY LAGKDVMISD DQLELKMQKQ QQRNPKSRQA KYLAEEDIVS DDQLEGYYRK  1200
YQRRAPKGKQ AKCVAGEDEM SDDQSEDNCQ RQQTSFSGKR QYKGIDREVK NVISDDQLLD  1260
HFQKQQRKFS KSRQNKHINE EVMDDSADNN SHLLRRTPKR RQAKCMDEDD INSDDEMEDD  1320
SHQPPMRALR SKQSKAKTLQ QMKQAKSIQV KNRTSRRGAR VLMKSKAPQQ IKQPSHLQNK  1380
QSSNSREFSL YMEEEEEGGP STRLRKRSAK AQESEGKVKD KQTKRKRVKN ATAAAKVSAG  1440
HAKVKDEEAE YQCDIEGCTM SFGSKQELVH HKRNICPVKG CGKKFFSHKY LVQHRRVHED  1500
DRPLKCPWKG CKMTFKWAWA RTEHIRVHTG ARPYVCAEPG CGQTFRFVSD FSRHKRKTGH  1560
SAKKSRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1295	1302	RRTPKRRQ
2	1405	1427	RKRSAKAQESEGKVKDKQTKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein