PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339019.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 1594aa MW: 180025 Da PI: 9.0521

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00037	1478	1503	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C++sF +k +L++H r+ + XP_027339019.1 1478 YQCDieGCTMSFGSKQELVHHKRNiC 1503 99********************9877 PP
2	zf-C2H2	12.8	0.00036	1503	1525	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_027339019.1 1503 CPvkGCGKKFFSHKYLVQHRRVH 1525 9999*****************99 PP
3	zf-C2H2	11.7	0.00078	1561	1587	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_027339019.1 1561 YVCAepGCGQTFRFVSDFSRHKRKtgH 1587 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1594 aa Download sequence
MGASEGNGDV LPWLKSLPVA PEYRPSVAEF RDPIGYIFKI EKEASKYGIC KIIPPFPPSP 60 KKTAIANLNR SLAVTGSTFT TRQQQIGFCP RKARPVRRSV WQSGDHYTFH EFESKAKSFE 120 KNYLKRHTKK GPGPGPLETE TLFWKATLDK PFSVEYANDM PGSAFSPKCC EAGDPGSSLA 180 DTPWNMREVS RANGSLLRFM KEEIPGVTSP MVYVAMLFSW FAWHVEDHDL HSLNYLHMGA 240 GKTWYGVPRD AAVAFEEVVR VHGYGGEINP LVTFAILGEK TTVMSPEVFI RAGVPCCRLV 300 QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK DAAIRRASIN YPPMVSHFQL 360 LYDLALALCS RIPTSINAEP RSSRLKDKKK GEGETVIKEL FVQDVLQSND LLHILGKESA 420 VVLLPRSSVD ISVCSKLRVG SQQSINVSNS EGMNSSKGFV SDDLVFNRSH GIKQEKIFYS 480 VKDKFTTLCE RNRISSFDVN GNICTSSSKP LQRNTGRETS QGDGLSDQRL FSCVTCGILS 540 FSCVAIVQPK EPAARYLMSA DCSFFNDWVV GSGVSCSKFA FSHEDKTIPE PNTYTGWMKK 600 NDQDGFDDFP VQSGQDALST ERERGNTALA LLASAYGNSD SEEDQGDPDI AVDSHESNVI 660 NSNSGRLLSL TPDFHASPMT ALDRVDDIPS KSVNYEDHMH HRFECNLSHE SFDHSSKKQD 720 YDVTSGFTFK NTRTVPNSTS NCSQDSHDAE RSLSVNPVVP IDNKNVSLVP KSDEDSTRMH 780 IFCLEHAVEA ELQLRPIGGA HILLLCHPDY PKIEAEAKLV GEDLGIDYTW KNIAYRHATK 840 EDEERIQSAL DSEEAIPGNG DWAVKLGINL FYSANLSRSP LYSKQMPYNS VIYYAFGRSS 900 PTSSPIEPKV YQRRSSKQKK VVAGKWCGKV WMSNQIHPLL AKKDSDDFED EKRLHGWILP 960 DEKIERPESN PKSETTSRKS GRKRKITGES ARTRKGSLAK KNIASDNSTE DKPNSQPRRI 1020 LRSKKSRCVE RDRAALEVGY APPHHRRKPI RKQTKCSESD AASYDSLNDN DHMQHWRNDI 1080 VGKTKFIDND VVSNDTVNYD SDWQQMGELS RKQVEDTDRD AISEDSLGVG SLQLRRKTSK 1140 GKHAKNIGQE DIISDDQMEN LSQKGKRKIP KSRHDKYLAG KDVMISDDQL ELKMQKQQQR 1200 NPKSRQAKYL AEEDIVSDDQ LEGYYRKYQR RAPKGKQAKC VAGEDEMSDD QSEDNCQRQQ 1260 TSFSGKRQYK GIDREVKNVI SDDQLLDHFQ KQQRKFSKSR QNKHINEEVM DDSADNNSHL 1320 LRRTPKRRQA KCMDEDDINS DDEMEDDSHQ PPMRALRSKQ SKAKTLQQMK QAKSIQVKNR 1380 TSRRGARVLM KSKAPQQIKQ PSHLQNKQSS NSREFSLYME EEEEGGPSTR LRKRSAKAQE 1440 SEGKVKDKQT KRKRVKNATA AAKVSAGHAK VKDEEAEYQC DIEGCTMSFG SKQELVHHKR 1500 NICPVKGCGK KFFSHKYLVQ HRRVHEDDRP LKCPWKGCKM TFKWAWARTE HIRVHTGARP 1560 YVCAEPGCGQ TFRFVSDFSR HKRKTGHSAK KSRQ

Sequence ? help Back to Top

Protein Sequence Length: 1594 aa Download sequence

MGASEGNGDV LPWLKSLPVA PEYRPSVAEF RDPIGYIFKI EKEASKYGIC KIIPPFPPSP  60
KKTAIANLNR SLAVTGSTFT TRQQQIGFCP RKARPVRRSV WQSGDHYTFH EFESKAKSFE  120
KNYLKRHTKK GPGPGPLETE TLFWKATLDK PFSVEYANDM PGSAFSPKCC EAGDPGSSLA  180
DTPWNMREVS RANGSLLRFM KEEIPGVTSP MVYVAMLFSW FAWHVEDHDL HSLNYLHMGA  240
GKTWYGVPRD AAVAFEEVVR VHGYGGEINP LVTFAILGEK TTVMSPEVFI RAGVPCCRLV  300
QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK DAAIRRASIN YPPMVSHFQL  360
LYDLALALCS RIPTSINAEP RSSRLKDKKK GEGETVIKEL FVQDVLQSND LLHILGKESA  420
VVLLPRSSVD ISVCSKLRVG SQQSINVSNS EGMNSSKGFV SDDLVFNRSH GIKQEKIFYS  480
VKDKFTTLCE RNRISSFDVN GNICTSSSKP LQRNTGRETS QGDGLSDQRL FSCVTCGILS  540
FSCVAIVQPK EPAARYLMSA DCSFFNDWVV GSGVSCSKFA FSHEDKTIPE PNTYTGWMKK  600
NDQDGFDDFP VQSGQDALST ERERGNTALA LLASAYGNSD SEEDQGDPDI AVDSHESNVI  660
NSNSGRLLSL TPDFHASPMT ALDRVDDIPS KSVNYEDHMH HRFECNLSHE SFDHSSKKQD  720
YDVTSGFTFK NTRTVPNSTS NCSQDSHDAE RSLSVNPVVP IDNKNVSLVP KSDEDSTRMH  780
IFCLEHAVEA ELQLRPIGGA HILLLCHPDY PKIEAEAKLV GEDLGIDYTW KNIAYRHATK  840
EDEERIQSAL DSEEAIPGNG DWAVKLGINL FYSANLSRSP LYSKQMPYNS VIYYAFGRSS  900
PTSSPIEPKV YQRRSSKQKK VVAGKWCGKV WMSNQIHPLL AKKDSDDFED EKRLHGWILP  960
DEKIERPESN PKSETTSRKS GRKRKITGES ARTRKGSLAK KNIASDNSTE DKPNSQPRRI  1020
LRSKKSRCVE RDRAALEVGY APPHHRRKPI RKQTKCSESD AASYDSLNDN DHMQHWRNDI  1080
VGKTKFIDND VVSNDTVNYD SDWQQMGELS RKQVEDTDRD AISEDSLGVG SLQLRRKTSK  1140
GKHAKNIGQE DIISDDQMEN LSQKGKRKIP KSRHDKYLAG KDVMISDDQL ELKMQKQQQR  1200
NPKSRQAKYL AEEDIVSDDQ LEGYYRKYQR RAPKGKQAKC VAGEDEMSDD QSEDNCQRQQ  1260
TSFSGKRQYK GIDREVKNVI SDDQLLDHFQ KQQRKFSKSR QNKHINEEVM DDSADNNSHL  1320
LRRTPKRRQA KCMDEDDINS DDEMEDDSHQ PPMRALRSKQ SKAKTLQQMK QAKSIQVKNR  1380
TSRRGARVLM KSKAPQQIKQ PSHLQNKQSS NSREFSLYME EEEEGGPSTR LRKRSAKAQE  1440
SEGKVKDKQT KRKRVKNATA AAKVSAGHAK VKDEEAEYQC DIEGCTMSFG SKQELVHHKR  1500
NICPVKGCGK KFFSHKYLVQ HRRVHEDDRP LKCPWKGCKM TFKWAWARTE HIRVHTGARP  1560
YVCAEPGCGQ TFRFVSDFSR HKRKTGHSAK KSRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1322	1329	RRTPKRRQ
2	1432	1454	RKRSAKAQESEGKVKDKQTKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein