PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027338971.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 326aa MW: 37399.4 Da PI: 8.985 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.1 | 4.2e-18 | 15 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G +W++Ia++++ gR++k+c++rw++ XP_027338971.1 15 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 60 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 60.3 | 4.1e-19 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ XP_027338971.1 67 RRPFTEEEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 110 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MEDSSAGEDT KTCPRGHWRP AEDEKLRQLV EQYGAQNWNS IAEKLQGRSG KSCRLRWFNQ 60 LDPRINRRPF TEEEEERLLA AHRIHGNKWA LIARLFPGRT DNAVKNHWHV IMARKQREQS 120 KLCGKRSFQD VYNDSNSSSF TEKRPSQQPQ DLLFSTRFGL ENGRFFDFRN LDKDNNRIVA 180 DTPSSSLASW NFASVPTSTN NSSVVDSLRK GGRDYVNSSS CSSNIYISEC SRSSDRSFLY 240 RIYPNPAFSL PNYKRVVPSP FRFLGSNDDG KIKRDLMSFC DNSSTFTKLR ASNAEKDHQQ 300 KDDDETNIEH KEVPFIDFLG VGVSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 2e-63 | MYB family protein |