PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338921.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 360aa MW: 40239.7 Da PI: 6.1837

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.5	1.6e-29	127	188	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ g+ +pr+YYrCt++ gC ++k+v+rs+edp+v+eitY+g+H+++ XP_027338921.1 127 LDDGYSWRKYGQKDILGAMYPRGYYRCTHRnvqGCLATKQVQRSDEDPTVFEITYRGKHTCT 188 59*************************98999************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MDNKGDPKSI IYELLQGLEL ARQLQVYLHM PSSSQETREL LIQKIISTFE KALEMVNWKG 60 PVGESSQQPS GVAIRMSDSP LSGSPRSEDS DKDLKDQDHN ISKKRNTLPR WTKQIRVKPG 120 VGVEGPLDDG YSWRKYGQKD ILGAMYPRGY YRCTHRNVQG CLATKQVQRS DEDPTVFEIT 180 YRGKHTCTVA SNVGSSSSPL ENQEPSLNTN PQEQQQQNVL QRLEQQPNEV LLSLRAGLRV 240 QTENLDSPGQ SFAPFHFPST SNIKIENQVF PSPIIENNYA ENFTSPSYMS PNTSGISHFS 300 VSPSGVHTFE GHPNLATSAS QINDMIPAAT SAANSPTVFP FDHFEFDGHN FTFDNPRFFS

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MDNKGDPKSI IYELLQGLEL ARQLQVYLHM PSSSQETREL LIQKIISTFE KALEMVNWKG  60
PVGESSQQPS GVAIRMSDSP LSGSPRSEDS DKDLKDQDHN ISKKRNTLPR WTKQIRVKPG  120
VGVEGPLDDG YSWRKYGQKD ILGAMYPRGY YRCTHRNVQG CLATKQVQRS DEDPTVFEIT  180
YRGKHTCTVA SNVGSSSSPL ENQEPSLNTN PQEQQQQNVL QRLEQQPNEV LLSLRAGLRV  240
QTENLDSPGQ SFAPFHFPST SNIKIENQVF PSPIIENNYA ENFTSPSYMS PNTSGISHFS  300
VSPSGVHTFE GHPNLATSAS QINDMIPAAT SAANSPTVFP FDHFEFDGHN FTFDNPRFFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24110.1	8e-56	WRKY family protein