PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338816.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 381aa MW: 42046.3 Da PI: 9.8382

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	91.8	1.5e-28	53	127	3	77
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaes 77 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WL++++k i++l+ +++++ + +++ XP_027338816.1 53 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVIDWLIEASKFDIDKLPPLQFPQGFSQFHHQ 127 79*************************************************************777773332222 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MMIMMMSSSR EGYQAKQEGD TIIIDKFSKA SSTSRQWSGF RNPRIVRVSR SFGGKDRHSK 60 VCTIRGLRDR RIRLSVPTAI QLYDLQDKLG LNQPSKVIDW LIEASKFDID KLPPLQFPQG 120 FSQFHHQQTL LPFHESSASH LSLGPFCDAN STFVRDGGIQ NLMARPRYWD NIDSISRVKG 180 KEVEKGKWIK TNEQINQDGV GGFNSLQVST QKLFPMGTTA TTPHYSPLPV GMLNNAMSYN 240 PYHSEPSSLS LSQFGSHGLF PSQVDPNPSG GNGVPFPSSL PLPSSGGSQL LFGPSSAATP 300 SLFTTYAPFM TNSVDNDPRQ FNHIQFLNSG SQLLPHPLIP SLHSFNSPVR PFPAAPFSSK 360 LLDSDSNNNN RSQQDKGSPC S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MMIMMMSSSR EGYQAKQEGD TIIIDKFSKA SSTSRQWSGF RNPRIVRVSR SFGGKDRHSK  60
VCTIRGLRDR RIRLSVPTAI QLYDLQDKLG LNQPSKVIDW LIEASKFDID KLPPLQFPQG  120
FSQFHHQQTL LPFHESSASH LSLGPFCDAN STFVRDGGIQ NLMARPRYWD NIDSISRVKG  180
KEVEKGKWIK TNEQINQDGV GGFNSLQVST QKLFPMGTTA TTPHYSPLPV GMLNNAMSYN  240
PYHSEPSSLS LSQFGSHGLF PSQVDPNPSG GNGVPFPSSL PLPSSGGSQL LFGPSSAATP  300
SLFTTYAPFM TNSVDNDPRQ FNHIQFLNSG SQLLPHPLIP SLHSFNSPVR PFPAAPFSSK  360
LLDSDSNNNN RSQQDKGSPC S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	1e-53	TCP family protein