PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338813.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TALE

Protein Properties

Length: 366aa MW: 40958.8 Da PI: 6.6346

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338813.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.3e-09	292	328	19	55
HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++++ LA+++gL+++q+ +WF N+R ++ XP_027338813.1 292 HYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 328 45679*****************************885 PP
2	ELK	41.1	3.7e-14	248	269	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ XP_027338813.1 248 ELKGQLLRKYSGYLGSLKQEFM 269 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MEGSSNATSY LMAFGENSGG LCPMTMMPLV TSHHGAHHPI HPNNNSNTNA NTNCLFLPNC 60 SNSGSPSIML DNNHNTTNNN SNNAGLGYYF MESDHHHHHN NNGSSSSSSS SAIKAKIMAH 120 PHYHRLLAAY VNCQKVGAPP EVVARLEEAC ASAVTMAGEA AGSSCIGEDP ALDQFMEAYC 180 EMLTKYEQEL SKPLKEAMLF LQRIECQFKN LTISSSDIAC NDGADRNGSS EDDVDLHNII 240 DPQAEDRELK GQLLRKYSGY LGSLKQEFMK KRKKGKLPKE ARQQLLEWWS RHYKWPYPSE 300 SQKLALAEST GLDQKQINNW FINQRKRHWK PSEDMQFVVV DPSHPHYYMD NVLGNPFPID 360 LSNPML

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MEGSSNATSY LMAFGENSGG LCPMTMMPLV TSHHGAHHPI HPNNNSNTNA NTNCLFLPNC  60
SNSGSPSIML DNNHNTTNNN SNNAGLGYYF MESDHHHHHN NNGSSSSSSS SAIKAKIMAH  120
PHYHRLLAAY VNCQKVGAPP EVVARLEEAC ASAVTMAGEA AGSSCIGEDP ALDQFMEAYC  180
EMLTKYEQEL SKPLKEAMLF LQRIECQFKN LTISSSDIAC NDGADRNGSS EDDVDLHNII  240
DPQAEDRELK GQLLRKYSGY LGSLKQEFMK KRKKGKLPKE ARQQLLEWWS RHYKWPYPSE  300
SQKLALAEST GLDQKQINNW FINQRKRHWK PSEDMQFVVV DPSHPHYYMD NVLGNPFPID  360
LSNPML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	264	273	LKQEFMKKRK
2	270	274	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-134	TALE family protein