PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338777.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 460aa MW: 48995.4 Da PI: 6.5067

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.4e-12	242	287	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_027338777.1 242 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 287 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MQPCSREMQG INSLINASQI SLQDLHNANQ IQNTHMNQLN HFDPTSHDDF LEQMLSSCSW 60 PELNPNKPLW DPNNTLHDIK HHDLSEETTP SSAENVAFPY DEHNTLASKF RNHQISPSVP 120 TTKAAALMLQ QHLLMPQMPL SLPRNDVVDA SSFKPPTPGG EASVQALYNS FAGSLHATTG 180 QASNQTQHFQ HPQGTSNPMQ GQNFAGAGGA TNQAPASGAA AGAPAQPRQR VRARRGQATD 240 PHSIAERLRR ERIAERMKAL QELVPNANKT DKASMLDEII DYVKFLQLQV KVLSMSRLGG 300 AAAVAPLVAD MSSEGGGDCI QANGNSNGGG VLNRNSNNNN NTQTTASTSN DSLTMTEQQV 360 AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLMNGNNQIP NNNGGGNHAN 420 PAVPSNGEGP SSPSMSVLTV QSAVVGNEGP VKDAASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MQPCSREMQG INSLINASQI SLQDLHNANQ IQNTHMNQLN HFDPTSHDDF LEQMLSSCSW  60
PELNPNKPLW DPNNTLHDIK HHDLSEETTP SSAENVAFPY DEHNTLASKF RNHQISPSVP  120
TTKAAALMLQ QHLLMPQMPL SLPRNDVVDA SSFKPPTPGG EASVQALYNS FAGSLHATTG  180
QASNQTQHFQ HPQGTSNPMQ GQNFAGAGGA TNQAPASGAA AGAPAQPRQR VRARRGQATD  240
PHSIAERLRR ERIAERMKAL QELVPNANKT DKASMLDEII DYVKFLQLQV KVLSMSRLGG  300
AAAVAPLVAD MSSEGGGDCI QANGNSNGGG VLNRNSNNNN NTQTTASTSN DSLTMTEQQV  360
AKLMEEDMGS AMQYLQGKGL CLMPISLATA ISTATCHSRN PLMNGNNQIP NNNGGGNHAN  420
PAVPSNGEGP SSPSMSVLTV QSAVVGNEGP VKDAASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	252	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-55	bHLH family protein