PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027338552.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 143aa MW: 16518.2 Da PI: 7.1506 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 137.5 | 4e-43 | 62 | 138 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv+gC+adls+ak+yh+rhkvCe h+kap+vl+++++qrfCqqCsrfhelsefD++krsCr+rLa+hnerrrk+++ XP_027338552.1 62 CQVDGCNADLSDAKSYHKRHKVCEYHAKAPAVLIAEQHQRFCQQCSRFHELSEFDDSKRSCRKRLAGHNERRRKNSS 138 **************************************************************************975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 143 aa Download sequence |
MDESWSVGKR SMKYKEEDEY EEEEEEEVSE MGYGEDGRKK RVVSDLQSKR GSKAGGSVPP 60 SCQVDGCNAD LSDAKSYHKR HKVCEYHAKA PAVLIAEQHQ RFCQQCSRFH ELSEFDDSKR 120 SCRKRLAGHN ERRRKNSSEY HGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33810.1 | 2e-40 | SBP family protein |