PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338538.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 665aa MW: 72687.5 Da PI: 6.4544

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.6	1.3e-24	116	217	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+ltpsd+++ g +++p+ +a+++ + ++ + l+++d +g We+++iyr++++r++lt+GW++Fv+ ++L +gD+vvF+ ++s XP_027338538.1 116 FAKILTPSDANNGGGFSVPRFCADSIfpplnfqDDPPVQ--NLSVTDVHGVAWEFRHIYRGTPRRHLLTTGWSKFVNNKKLVAGDSVVFM--KNS 206 89*******************999*96555556..6********************************************..678 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+v+r+ XP_027338538.1 207 RGGLFVGVRRA 217 8889***97 PP
2	Auxin_resp	91.3	1.7e-30	276	359	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+ +++FevvY+P+a++seFvv+ e v++a++v + +GmR+kma+et+dss+ ++ +Gtv+ vs ++ +W+ S+Wr+L+ XP_027338538.1 276 AAELAALNMAFEVVYYPKAGWSEFVVNEEAVNEAMSVAWGPGMRVKMAMETDDSSRMTWfQGTVSCVSVNENGQWRYSPWRMLQ 359 67889999**************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MPRQAVSPPL PHPRPMDPKI WRACAGASVQ IPTLHSRVYY FPQGHFDQAS SVPRHLSKLL 60 RSKSFILCRI TSVQFLADPL TDEVFAKLVL VPVSDYFAAP SSVPPTAASD DDVVSFAKIL 120 TPSDANNGGG FSVPRFCADS IFPPLNFQDD PPVQNLSVTD VHGVAWEFRH IYRGTPRRHL 180 LTTGWSKFVN NKKLVAGDSV VFMKNSRGGL FVGVRRATRF TSGKGGGNVG SNWSLQIGGM 240 ENRVEEEEKE EEEENLSEVF SRDGKGKLST KKVAEAAELA ALNMAFEVVY YPKAGWSEFV 300 VNEEAVNEAM SVAWGPGMRV KMAMETDDSS RMTWFQGTVS CVSVNENGQW RYSPWRMLQI 360 TWDEPEVLQN SKWVSPWQVE LVSTTPALHS AFPSAKRFRS SQGSEVFTDG EGDPFSMTRF 420 TNSAMSPLNQ TLLSYGTFPA GMQGARHDLF SAPSFSNFPS DASRLCMGNS LGNNMVPRLT 480 TLPTELNVGS PQSDNLSPNS NSSLHSCATE LVGNHNCNST KPGNRSFPSD TSRLCMGNSL 540 GNNTVPKLTL STELNVGCFQ SDDLSPNSNS SLHSCATELV GNHNYNSTKP KSVSIHLFGN 600 LIQINSVECD LHGTGLTGVD SRKGCNETEG ISNPLDDSLA CSKLPDRLDD QCQSASKVGT 660 WYFSK

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MPRQAVSPPL PHPRPMDPKI WRACAGASVQ IPTLHSRVYY FPQGHFDQAS SVPRHLSKLL  60
RSKSFILCRI TSVQFLADPL TDEVFAKLVL VPVSDYFAAP SSVPPTAASD DDVVSFAKIL  120
TPSDANNGGG FSVPRFCADS IFPPLNFQDD PPVQNLSVTD VHGVAWEFRH IYRGTPRRHL  180
LTTGWSKFVN NKKLVAGDSV VFMKNSRGGL FVGVRRATRF TSGKGGGNVG SNWSLQIGGM  240
ENRVEEEEKE EEEENLSEVF SRDGKGKLST KKVAEAAELA ALNMAFEVVY YPKAGWSEFV  300
VNEEAVNEAM SVAWGPGMRV KMAMETDDSS RMTWFQGTVS CVSVNENGQW RYSPWRMLQI  360
TWDEPEVLQN SKWVSPWQVE LVSTTPALHS AFPSAKRFRS SQGSEVFTDG EGDPFSMTRF  420
TNSAMSPLNQ TLLSYGTFPA GMQGARHDLF SAPSFSNFPS DASRLCMGNS LGNNMVPRLT  480
TLPTELNVGS PQSDNLSPNS NSSLHSCATE LVGNHNCNST KPGNRSFPSD TSRLCMGNSL  540
GNNTVPKLTL STELNVGCFQ SDDLSPNSNS SLHSCATELV GNHNYNSTKP KSVSIHLFGN  600
LIQINSVECD LHGTGLTGVD SRKGCNETEG ISNPLDDSLA CSKLPDRLDD QCQSASKVGT  660
WYFSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-147	ARF family protein